ARC Centre of Excellence for Plant Energy Biology

MPIC — SAM50 Athena Promoter Motif Predictions

Putative and known regulatory elements within upstream regions of each gene were obtained from, and enable analysis of co-regulated genes sourced from, Athena: Arabidopsis thaliana a resource for rapid visualization and systematic analysis of Arabidopsis promoter sequences (O’Connor et al. 2005).

Locus Species Motif Pattern Start End Sense Sequence
At3g11070 Species Arabidopsis thaliana Arabidopsis thaliana ARF binding site motifTGTCTC-422-417+TGTCTC
At3g11070 Species Arabidopsis thaliana Arabidopsis thaliana AtMYC2 BS in RD22CACATG-522-517+CACATG
At3g11070 Species Arabidopsis thaliana Arabidopsis thaliana AtMYC2 BS in RD22CACATG-668-663-CATGTG
At3g11070 Species Arabidopsis thaliana Arabidopsis thaliana CARGCW8GATCWWWWWWWWG-400-391+CAATATTAAG
At3g11070 Species Arabidopsis thaliana Arabidopsis thaliana CARGCW8GATCWWWWWWWWG-400-391-CAATATTAAG
At3g11070 Species Arabidopsis thaliana Arabidopsis thaliana CARGCW8GATCWWWWWWWWG-739-730+CTTAATATAG
At3g11070 Species Arabidopsis thaliana Arabidopsis thaliana CARGCW8GATCWWWWWWWWG-739-730-CTTAATATAG
At3g11070 Species Arabidopsis thaliana Arabidopsis thaliana GAREATTAACAAR-244-238+TAACAAA
At3g11070 Species Arabidopsis thaliana Arabidopsis thaliana GAREATTAACAAR-386-380+TAACAAG
At3g11070 Species Arabidopsis thaliana Arabidopsis thaliana GAREATTAACAAR-483-477+TAACAAA
At3g11070 Species Arabidopsis thaliana Arabidopsis thaliana Ibox promoter motifGATAAG-637-632+GATAAG
At3g11070 Species Arabidopsis thaliana Arabidopsis thaliana LEAFYATAGCCAATGT-255-249+CCAATGT
At3g11070 Species Arabidopsis thaliana Arabidopsis thaliana MYB1ATWAACCA-239-234+AAACCA
At3g11070 Species Arabidopsis thaliana Arabidopsis thaliana MYB1LEPRGTTAGTT-389-383-AACTAAC
At3g11070 Species Arabidopsis thaliana Arabidopsis thaliana MYB4 binding site motifAMCWAMC-389-383+AACTAAC
At3g11070 Species Arabidopsis thaliana Arabidopsis thaliana MYCATERD1CATGTG-522-517-CACATG
At3g11070 Species Arabidopsis thaliana Arabidopsis thaliana MYCATERD1CATGTG-668-663+CATGTG
At3g11070 Species Arabidopsis thaliana Arabidopsis thaliana TATA-box MotifTATAAA-462-457+TATAAA
At3g11070 Species Arabidopsis thaliana Arabidopsis thaliana TATA-box MotifTATAAA-468-463+TATAAA
At3g11070 Species Arabidopsis thaliana Arabidopsis thaliana TATA-box MotifTATAAA-660-655-TTTATA
At3g11070 Species Arabidopsis thaliana Arabidopsis thaliana W-box promoter motifTTGACY-128-123-AGTCAA
At5g05520 Species Arabidopsis thaliana Arabidopsis thaliana BoxII promoter motifGGTTAA-102-97-TTAACC
At5g05520 Species Arabidopsis thaliana Arabidopsis thaliana BoxII promoter motifGGTTAA-104-99+GGTTAA
At5g05520 Species Arabidopsis thaliana Arabidopsis thaliana MYB1ATWAACCA-101-96+TAACCA
At5g05520 Species Arabidopsis thaliana Arabidopsis thaliana MYB1ATWAACCA-85-80+TAACCA
At5g05520 Species Arabidopsis thaliana Arabidopsis thaliana W-box promoter motifTTGACY-112-107-GGTCAA

Sequences (FASTA)