ARC Centre of Excellence for Plant Energy Biology

MPIC — SAM50 CDD Results

Sequences for all species were analysed by CDD (Marchler-Bauer et al. 2011) using default settings. *Columns are described in the CDD documentation.

Domains Genes
Bac_surface_Ag superfamily 37
Bac_surface_Ag 32
Surf_Ag_VNR superfamily 12
Surf_Ag_VNR 4
COG4775 2
DUF2405 superfamily 1
QueryHit typePSSM-IDFromToE-ValueBitscoreAccessionShort nameIncompleteSuperfamily
AT3G11070 Species Arabidopsis thalianaspecific2163001845173.11766e-26107.882pfam01103Bac_surface_Ag - cl18362
AT3G11070 Species Arabidopsis thalianasuperfamily2163001845173.11766e-26107.882cl18362Bac_surface_Ag superfamily - -
AT5G05520 Species Arabidopsis thalianaspecific2163001815152.50199e-28114.045pfam01103Bac_surface_Ag - cl18362
AT5G05520 Species Arabidopsis thalianasuperfamily2163001815152.50199e-28114.045cl18362Bac_surface_Ag superfamily - -
AT5G05520 Species Arabidopsis thalianasuperfamily219346741510.0036378235.7627cl18507Surf_Ag_VNR superfamily - -
Bra001389 Species Brassica rapaspecific2163001765095.57824e-29115.586pfam01103Bac_surface_Ag - cl18362
Bra001389 Species Brassica rapasuperfamily2163001765095.57824e-29115.586cl18362Bac_surface_Ag superfamily - -
Bra009118 Species Brassica rapaspecific2163001835259.66249e-25103.645pfam01103Bac_surface_Ag - cl18362
Bra009118 Species Brassica rapasuperfamily2163001835259.66249e-25103.645cl18362Bac_surface_Ag superfamily - -
Bra009118 Species Brassica rapasuperfamily219346761530.0017177236.9183cl18507Surf_Ag_VNR superfamily - -
Bra034868 Species Brassica rapaspecific2163001724826.36347e-2295.1704pfam01103Bac_surface_Ag - cl18362
Bra034868 Species Brassica rapasuperfamily2163001724826.36347e-2295.1704cl18362Bac_surface_Ag superfamily - -
gi|17552460 Species Caenorhabditis elegansspecific2163001284331.42824e-27110.578pfam01103Bac_surface_Ag - cl18362
gi|17552460 Species Caenorhabditis eleganssuperfamily2163001284331.42824e-27110.578cl18362Bac_surface_Ag superfamily - -
CMO061CT Species Cyanidioschyzon merolaespecific2163002345261.26976e-25106.341pfam01103Bac_surface_Ag - cl18362
CMO061CT Species Cyanidioschyzon merolaesuperfamily2163002345261.26976e-25106.341cl18362Bac_surface_Ag superfamily - -
Cre06.g308900 Species Chlamydomonas reinhardtiispecific2163001705351.76518e-24103.26pfam01103Bac_surface_Ag - cl18362
Cre06.g308900 Species Chlamydomonas reinhardtiisuperfamily2163001705351.76518e-24103.26cl18362Bac_surface_Ag superfamily - -
Carubv10000717 Species Capsella rubellaspecific2163001815232.05689e-26108.652pfam01103Bac_surface_Ag - cl18362
Carubv10000717 Species Capsella rubellasuperfamily2163001815232.05689e-26108.652cl18362Bac_surface_Ag superfamily - -
Carubv10013427 Species Capsella rubellaspecific2163001875154.98553e-24101.719pfam01103Bac_surface_Ag - cl18362
Carubv10013427 Species Capsella rubellasuperfamily2163001875154.98553e-24101.719cl18362Bac_surface_Ag superfamily - -
Cucsa.137480 Species Cucumis sativusspecific2163001905335.92151e-26107.497pfam01103Bac_surface_Ag - cl18362
Cucsa.137480 Species Cucumis sativussuperfamily2163001905335.92151e-26107.497cl18362Bac_surface_Ag superfamily - -
Cucsa.137480 Species Cucumis sativussuperfamily219346841600.0091894234.6071cl18507Surf_Ag_VNR superfamily - -
Eucgr.J00180 Species Eucalyptus grandisspecific2163001945321.35616e-27112.119pfam01103Bac_surface_Ag - cl18362
Eucgr.J00180 Species Eucalyptus grandissuperfamily2163001945321.35616e-27112.119cl18362Bac_surface_Ag superfamily - -
Esi0503_0006 Species Ectocarpus siliculosussuperfamily2163002604509.0877e-1882.4588cl18362Bac_surface_Ag superfamilyN -
Esi0503_0006 Species Ectocarpus siliculosusmulti-dom227116124501.41698e-23102.431COG4775COG4775N -
Glyma02g43160 Species Glycine maxspecific2163001865291.9347e-2297.0964pfam01103Bac_surface_Ag - cl18362
Glyma02g43160 Species Glycine maxsuperfamily2163001865291.9347e-2297.0964cl18362Bac_surface_Ag superfamily - -
Glyma02g43160 Species Glycine maxspecific219346791560.00028307239.2295pfam07244Surf_Ag_VNR - cl18507
Glyma02g43160 Species Glycine maxsuperfamily219346791560.00028307239.2295cl18507Surf_Ag_VNR superfamily - -
Glyma11g35531 Species Glycine maxsuperfamily2163001905252.76691e-1987.4664cl18362Bac_surface_Ag superfamily - -
Glyma14g06250 Species Glycine maxspecific2163001895325.72656e-2295.5556pfam01103Bac_surface_Ag - cl18362
Glyma14g06250 Species Glycine maxsuperfamily2163001895325.72656e-2295.5556cl18362Bac_surface_Ag superfamily - -
Glyma14g06250 Species Glycine maxsuperfamily219346821590.00081212937.6887cl18507Surf_Ag_VNR superfamily - -
gi|225543166 Species Homo sapiensspecific2163001514687.56634e-63208.419pfam01103Bac_surface_Ag - cl18362
gi|225543166 Species Homo sapienssuperfamily2163001514687.56634e-63208.419cl18362Bac_surface_Ag superfamily - -
gi|225543166 Species Homo sapienssuperfamily219346451240.0085118634.6071cl18507Surf_Ag_VNR superfamily - -
Medtr3g071450 Species Medicago truncatulaspecific2163001705133.68695e-2090.1628pfam01103Bac_surface_Ag - cl18362
Medtr3g071450 Species Medicago truncatulasuperfamily2163001705133.68695e-2090.1628cl18362Bac_surface_Ag superfamily - -
Medtr3g071450 Species Medicago truncatulaspecific219346631407.79181e-0643.8519pfam07244Surf_Ag_VNR - cl18507
Medtr3g071450 Species Medicago truncatulasuperfamily219346631407.79181e-0643.8519cl18507Surf_Ag_VNR superfamily - -
Medtr5g083050 Species Medicago truncatulaspecific2163001775561.62677e-2297.4816pfam01103Bac_surface_Ag - cl18362
Medtr5g083050 Species Medicago truncatulasuperfamily2163001775561.62677e-2297.4816cl18362Bac_surface_Ag superfamily - -
Medtr5g083050 Species Medicago truncatulasuperfamily220678441340.0037665836.8173cl10972DUF2405 superfamilyN -
gi|85098006 Species Neurospora crassaspecific2163001785206.44883e-36135.616pfam01103Bac_surface_Ag - cl18362
gi|85098006 Species Neurospora crassasuperfamily2163001785206.44883e-36135.616cl18362Bac_surface_Ag superfamily - -
LOC_Os05g39390 Species Oryza sativaspecific2163001755203.50702e-26107.882pfam01103Bac_surface_Ag - cl18362
LOC_Os05g39390 Species Oryza sativasuperfamily2163001755203.50702e-26107.882cl18362Bac_surface_Ag superfamily - -
LOC_Os11g01490 Species Oryza sativaspecific2163001775202.08591e-2399.7928pfam01103Bac_surface_Ag - cl18362
LOC_Os11g01490 Species Oryza sativasuperfamily2163001775202.08591e-2399.7928cl18362Bac_surface_Ag superfamily - -
LOC_Os12g01500 Species Oryza sativaspecific2163001785211.05531e-23100.563pfam01103Bac_surface_Ag - cl18362
LOC_Os12g01500 Species Oryza sativasuperfamily2163001785211.05531e-23100.563cl18362Bac_surface_Ag superfamily - -
Phpat.023G045500 Species Physcomitrella patensspecific2163001735183.531e-25104.8pfam01103Bac_surface_Ag - cl18362
Phpat.023G045500 Species Physcomitrella patenssuperfamily2163001735183.531e-25104.8cl18362Bac_surface_Ag superfamily - -
Phpat.023G045500 Species Physcomitrella patensspecific219346661430.00020287439.6147pfam07244Surf_Ag_VNR - cl18507
Phpat.023G045500 Species Physcomitrella patenssuperfamily219346661430.00020287439.6147cl18507Surf_Ag_VNR superfamily - -
Phpat.024G008700 Species Physcomitrella patensspecific2163001705183.33343e-27110.578pfam01103Bac_surface_Ag - cl18362
Phpat.024G008700 Species Physcomitrella patenssuperfamily2163001705183.33343e-27110.578cl18362Bac_surface_Ag superfamily - -
Phpat.024G008700 Species Physcomitrella patenssuperfamily219346631400.00077614937.6887cl18507Surf_Ag_VNR superfamily - -
Potri.008G071800 Species Populus trichocarpaspecific2163001745181.13342e-25106.341pfam01103Bac_surface_Ag - cl18362
Potri.008G071800 Species Populus trichocarpasuperfamily2163001745181.13342e-25106.341cl18362Bac_surface_Ag superfamily - -
Potri.010G185600 Species Populus trichocarpaspecific2163001795205.6356e-25104.415pfam01103Bac_surface_Ag - cl18362
Potri.010G185600 Species Populus trichocarpasuperfamily2163001795205.6356e-25104.415cl18362Bac_surface_Ag superfamily - -
29814.t000035 Species Ricinus communisspecific2163001735171.15968e-27112.119pfam01103Bac_surface_Ag - cl18362
29814.t000035 Species Ricinus communissuperfamily2163001735171.15968e-27112.119cl18362Bac_surface_Ag superfamily - -
YNL026W Species Saccharomyces cerevisiaespecific2163001824732.25889e-48170.284pfam01103Bac_surface_Ag - cl18362
YNL026W Species Saccharomyces cerevisiaesuperfamily2163001824732.25889e-48170.284cl18362Bac_surface_Ag superfamily - -
YNL026W Species Saccharomyces cerevisiaemulti-dom22711614712.94807e-100320.069COG4775COG4775N -
139554 Species Selaginella moellendorffiispecific2163001154499.95006e-29114.43pfam01103Bac_surface_Ag - cl18362
139554 Species Selaginella moellendorffiisuperfamily2163001154499.95006e-29114.43cl18362Bac_surface_Ag superfamily - -
139554 Species Selaginella moellendorffiispecific2193468850.00039392138.4591pfam07244Surf_Ag_VNR - cl18507
139554 Species Selaginella moellendorffiisuperfamily2193468850.00039392138.4591cl18507Surf_Ag_VNR superfamily - -
PGSC0003DMG400008029 Species Solanum tuberosumspecific2163001775247.81884e-25104.03pfam01103Bac_surface_Ag - cl18362
PGSC0003DMG400008029 Species Solanum tuberosumsuperfamily2163001775247.81884e-25104.03cl18362Bac_surface_Ag superfamily - -
PGSC0003DMG400008029 Species Solanum tuberosumsuperfamily219346701470.0019743536.5331cl18507Surf_Ag_VNR superfamily - -
Vocar20007806 Species Volvox carterispecific2163001615125.85454e-31121.364pfam01103Bac_surface_Ag - cl18362
Vocar20007806 Species Volvox carterisuperfamily2163001615125.85454e-31121.364cl18362Bac_surface_Ag superfamily - -
GSVIVG01032775001 Species Vitis viniferaspecific2163001194641.22368e-27111.349pfam01103Bac_surface_Ag - cl18362
GSVIVG01032775001 Species Vitis viniferasuperfamily2163001194641.22368e-27111.349cl18362Bac_surface_Ag superfamily - -
GSVIVG01032775001 Species Vitis viniferasuperfamily21934613890.0033759935.7627cl18507Surf_Ag_VNR superfamily - -
AC197705.4_FG007 Species Zea maysspecific2163001835271.19356e-29117.897pfam01103Bac_surface_Ag - cl18362
AC197705.4_FG007 Species Zea mayssuperfamily2163001835271.19356e-29117.897cl18362Bac_surface_Ag superfamily - -
GRMZM2G057557 Species Zea mayssuperfamily2163001705132.22761e-1472.8289cl18362Bac_surface_Ag superfamily - -
GRMZM2G062080 Species Zea mayssuperfamily21630013168.52897e-1469.3621cl18362Bac_surface_Ag superfamily - -
GRMZM5G832582 Species Zea mayssuperfamily2163001553711.87964e-1368.9769cl18362Bac_surface_Ag superfamilyN -

Sequences (FASTA)