ARC Centre of Excellence for Plant Energy Biology

MPIC — SAM37,SAM37-METAXIN Targeting Predictions

Computational targeting prediction programs were run en bloc for all included species using each algorithm’s default parameters applicable per species kingdom (Boden and Hawkins 2005; Claros 1995; Emanuelsson et al. 2000; Emanuelsson et al. 1999; Neuberger et al. 2003; Small et al. 2004).

Prediction Frequency
mTP 2
cTP 1

Abbreviations

cTP: chloroplast targeting peptide (plants only)
ER: endoplasmic reticulum
mTP: mitochrondrial targeting peptide
SP: signal peptide / secretory pathway

mTP predicted plus 1 other Species ChloroPMitoProt2PProwlerPredotarPTS1TargetP
AT2G19080 Species Arabidopsis thaliana Arabidopsis thaliana
Bra038562 Species Brassica rapa Brassica rapa
Bra038838 Species Brassica rapa Brassica rapa
gi|17507265 Species Caenorhabditis elegans Caenorhabditis elegans
gi|392895600 Species Caenorhabditis elegans Caenorhabditis elegans
A8IDQ8_CHLRE|tr Species Chlamydomonas reinhardtii Chlamydomonas reinhardtii
Carubv10013910 Species Capsella rubella Capsella rubella
Cucsa.081250 Species Cucumis sativus Cucumis sativus
Eucgr.C00132 Species Eucalyptus grandis Eucalyptus grandis
Eucgr.C00132.1 Species Eucalyptus grandis Eucalyptus grandis
Esi0338_0018 Species Ectocarpus siliculosus Ectocarpus siliculosus
Glyma09g06470 Species Glycine max Glycine max
Glyma13g00660 Species Glycine max Glycine max
Glyma15g17695 Species Glycine max Glycine max
Glyma17g06820 Species Glycine max Glycine max mTP
gi|119616246 Species Homo sapiens Homo sapiens
gi|1326108 Species Homo sapiens Homo sapiens
gi|56789715 Species Homo sapiens Homo sapiens
Medtr2g036910 Species Medicago truncatula Medicago truncatula
Medtr4g127630 Species Medicago truncatula Medicago truncatula
gi|85114751 Species Neurospora crassa Neurospora crassa
LOC_Os06g07160.1 Species Oryza sativa Oryza sativa
Phpat.004G037800 Species Physcomitrella patens Physcomitrella patens
Phpat.012G046000 Species Physcomitrella patens Physcomitrella patens cTP
Potri.006G077100 Species Populus trichocarpa Populus trichocarpa
Potri.018G147700 Species Populus trichocarpa Populus trichocarpa
Potri.T161600 Species Populus trichocarpa Populus trichocarpa
29462.m000385|29462.t000013 Species Ricinus communis Ricinus communis
YMR060C Species Saccharomyces cerevisiae Saccharomyces cerevisiae
403021 Species Selaginella moellendorffii Selaginella moellendorffii
405344 Species Selaginella moellendorffii Selaginella moellendorffii
422696 Species Selaginella moellendorffii Selaginella moellendorffii
PGSC0003DMG400008514 Species Solanum tuberosum Solanum tuberosum
D8TKN0|tr Species Volvox carteri Volvox carteri
GSVIVG01010902001 Species Vitis vinifera Vitis vinifera
GRMZM2G005209 Species Zea mays Zea mays mTP

Sequences (FASTA)