ARC Centre of Excellence for Plant Energy Biology

MPIC — PreP1,PreP2,CYM1 Transmembrane Helix Domain Predictions

Num_PredHel indicates the number of predicted transmembrane helix domains calculated by DAS and TMHMM predictors (for methods, see MPIC paper). A tally of both predictors is shown first.

Num_PredHel Frequency
1 2

1 predicted Species DAS_Num_PredHelTMHMM_Num_PredHel
AT1G49630|AtPrep2 Species Arabidopsis thaliana Arabidopsis thaliana
AT3G19170|AtPrep1 Species Arabidopsis thaliana Arabidopsis thaliana
Bra001738 Species Brassica rapa Brassica rapa
Bra018811 Species Brassica rapa Brassica rapa
Bra037536 Species Brassica rapa Brassica rapa
gi|71981120 Ce|Prep1 Species Caenorhabditis elegans Caenorhabditis elegans
CMM154CT Cm|CYM1 Species Cyanidioschyzon merolae Cyanidioschyzon merolae 1
CMQ222CT Cm|CYM1 Species Cyanidioschyzon merolae Cyanidioschyzon merolae
Cre01.g020900.t1.3 Species Chlamydomonas reinhardtii Chlamydomonas reinhardtii
Carubv10011558m.g Species Capsella rubella Capsella rubella
Carubv10012870m.g Species Capsella rubella Capsella rubella
Cucsa.219950.1 Species Cucumis sativus Cucumis sativus
gi|66803803 Species Dictyostelium discoideum Dictyostelium discoideum
gi|66806529 Species Dictyostelium discoideum Dictyostelium discoideum 1
gi|66824379 Species Dictyostelium discoideum Dictyostelium discoideum
Eucgr.G01465.1 Species Eucalyptus grandis Eucalyptus grandis
Esi0186_0008 Species Ectocarpus siliculosus Ectocarpus siliculosus
Esi0186_0009 Species Ectocarpus siliculosus Ectocarpus siliculosus
Glyma01g45650.2 Species Glycine max Glycine max
Glyma04g13640.1 Species Glycine max Glycine max
CYM1|gi|334085248 Hs Species Homo sapiens Homo sapiens
Medtr7g082690.1 Species Medicago truncatula Medicago truncatula
CYM1|gi|85099301 Nc Species Neurospora crassa Neurospora crassa
LOC_Os02g52390.1 Species Oryza sativa Oryza sativa
Phpat.005G011400.1 Species Physcomitrella patens Physcomitrella patens
Potri.004G142300.1 Species Populus trichocarpa Populus trichocarpa
Potri.009G103700.1 Species Populus trichocarpa Populus trichocarpa
29801.m003206|29801.t000151 Species Ricinus communis Ricinus communis
Cym1|Sc|YDR430C Species Saccharomyces cerevisiae Saccharomyces cerevisiae
152047 Species Selaginella moellendorffii Selaginella moellendorffii
PGSC0003DMG400025820|PGSC0003DMT400066393 Species Solanum tuberosum Solanum tuberosum
Vocar20010196m.g Species Volvox carteri Volvox carteri
GSVIVG01031766001|GSVIVT01031766001 Species Vitis vinifera Vitis vinifera
AC151525_26.1 Mt Species Zea mays Zea mays
GRMZM2G072861_T01 Species Zea mays Zea mays
GRMZM2G101271_T01 Species Zea mays Zea mays

Sequences (FASTA)