ARC Centre of Excellence for Plant Energy Biology

MPIC — PreP1,PreP2,CYM1 Athena Promoter Motif Predictions

Putative and known regulatory elements within upstream regions of each gene were obtained from, and enable analysis of co-regulated genes sourced from, Athena: Arabidopsis thaliana a resource for rapid visualization and systematic analysis of Arabidopsis promoter sequences (O’Connor et al. 2005).

Locus	Species	Motif	Pattern	Start	End	Sense	Sequence
At1g49630	Arabidopsis thaliana	CCA1 binding site motif	AAMAATCT	-123	-116	-	AGATTGTT
At1g49630	Arabidopsis thaliana	MYB4 binding site motif	AMCWAMC	-97	-91	-	GTTAGGT
At1g49630	Arabidopsis thaliana	TATA-box Motif	TATAAA	-276	-271	-	TTTATA
At3g19170	Arabidopsis thaliana	ABFs binding site motif	CACGTGGC	-618	-611	-	GCCACGTG
At3g19170	Arabidopsis thaliana	ABRE binding site motif	YACGTGGC	-618	-611	-	GCCACGTG
At3g19170	Arabidopsis thaliana	ABRE-like binding site motif	BACGTGKM	-616	-609	+	CACGTGGA
At3g19170	Arabidopsis thaliana	ABRE-like binding site motif	BACGTGKM	-618	-611	-	GCCACGTG
At3g19170	Arabidopsis thaliana	ACGTABREMOTIFA2OSEM	ACGTGKC	-618	-612	-	GCCACGT
At3g19170	Arabidopsis thaliana	CACGTGMOTIF	CACGTG	-616	-611	+	CACGTG
At3g19170	Arabidopsis thaliana	CACGTGMOTIF	CACGTG	-616	-611	-	CACGTG
At3g19170	Arabidopsis thaliana	CACGTGMOTIF	CACGTG	-629	-624	+	CACGTG
At3g19170	Arabidopsis thaliana	CACGTGMOTIF	CACGTG	-629	-624	-	CACGTG
At3g19170	Arabidopsis thaliana	EveningElement promoter motif	AAAATATCT	-303	-295	-	AGATATTTT
At3g19170	Arabidopsis thaliana	GBF1 /2 /3 BS in ADH1	CCACGTGG	-617	-610	+	CCACGTGG
At3g19170	Arabidopsis thaliana	GBF1 /2 /3 BS in ADH1	CCACGTGG	-617	-610	-	CCACGTGG
At3g19170	Arabidopsis thaliana	GBOXLERBCS	MCACGTGGC	-618	-610	-	GCCACGTGG
At3g19170	Arabidopsis thaliana	PI promoter motif	GTGATCAC	-626	-619	+	GTGATCAC
At3g19170	Arabidopsis thaliana	PI promoter motif	GTGATCAC	-626	-619	-	GTGATCAC

Sequences (FASTA)