MPIC
Putative and known regulatory elements within upstream regions of each gene were obtained from, and enable analysis of co-regulated genes sourced from, Athena: Arabidopsis thaliana a resource for rapid visualization and systematic analysis of Arabidopsis promoter sequences (O’Connor et al. 2005).
| Locus | Species | Motif | Pattern | Start | End | Sense | Sequence |
|---|---|---|---|---|---|---|---|
At2g35795  |
Arabidopsis thaliana | TATA-box Motif | TATAAA | -65 | -60 | + | TATAAA |
| At3g09700 |
Arabidopsis thaliana | Gap-box Motif | CAAATGAA | -442 | -435 | - | TTCATTTG |
| At3g09700 |
Arabidopsis thaliana | L1-box promoter motif | TAAATGYA | -181 | -174 | + | TAAATGTA |
| At3g09700 |
Arabidopsis thaliana | MYB binding site promoter | MACCWAMC | -18 | -11 | + | AACCAACC |
| At3g09700 |
Arabidopsis thaliana | MYB1AT | WAACCA | -159 | -154 | + | AAACCA |
| At3g09700 |
Arabidopsis thaliana | MYB1AT | WAACCA | -467 | -462 | - | TGGTTA |
| At3g09700 |
Arabidopsis thaliana | MYB2AT | TAACTG | -175 | -170 | + | TAACTG |
| At3g09700 |
Arabidopsis thaliana | MYB4 binding site motif | AMCWAMC | -17 | -11 | + | ACCAACC |
| At5g03030 |
Arabidopsis thaliana | BoxII promoter motif | GGTTAA | -77 | -72 | - | TTAACC |
| At5g03030 |
Arabidopsis thaliana | DRE core motif | RCCGAC | -40 | -35 | + | ACCGAC |
| At5g03030 |
Arabidopsis thaliana | DRE core motif | RCCGAC | -57 | -52 | + | ACCGAC |
| At5g03030 |
Arabidopsis thaliana | DRE core motif | RCCGAC | -74 | -69 | + | ACCGAC |
| At5g03030 |
Arabidopsis thaliana | DRE core motif | RCCGAC | -93 | -88 | - | GTCGGT |
| At5g03030 |
Arabidopsis thaliana | GCC-box promoter motif | GCCGCC | -175 | -170 | - | GGCGGC |
| At5g03030 |
Arabidopsis thaliana | LTRE promoter motif | ACCGACA | -40 | -34 | + | ACCGACA |
| At5g03030 |
Arabidopsis thaliana | LTRE promoter motif | ACCGACA | -57 | -51 | + | ACCGACA |
| At5g03030 |
Arabidopsis thaliana | LTRE promoter motif | ACCGACA | -74 | -68 | + | ACCGACA |
| At5g03030 |
Arabidopsis thaliana | MYB binding site promoter | MACCWAMC | -370 | -363 | - | GTTAGGTT |
| At5g03030 |
Arabidopsis thaliana | MYB4 binding site motif | AMCWAMC | -145 | -139 | + | ACCAAAC |
| At5g03030 |
Arabidopsis thaliana | MYB4 binding site motif | AMCWAMC | -370 | -364 | - | GTTAGGT |
| At5g03030 |
Arabidopsis thaliana | T-box promoter motif | ACTTTG | -185 | -180 | + | ACTTTG |
| At5g03030 |
Arabidopsis thaliana | W-box promoter motif | TTGACY | -115 | -110 | + | TTGACC |
| At5g03030 |
Arabidopsis thaliana | W-box promoter motif | TTGACY | -86 | -81 | + | TTGACT |
