ARC Centre of Excellence for Plant Energy Biology

MPIC — PAM18 – Eucgr.G02806.1 InterPro Results

Sequences for Eucalyptus grandis were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.

Database Detected Description Start End E-Value
InterPro IPR001623 DnaJ domain:
Gene3D G3DSA:1.10.287.110 41 104 9.8E-22
Pfam PF00226 DnaJ domain 55 99 1.0E-6
ProSiteProfiles PS50076 dnaJ domain profile. 51 104 0.0
SMART SM00271 DnaJ molecular chaperone homology domain 50 104 4.399999674E-8
SUPERFAMILY SSF46565 41 102 0.0
InterPro No IPR Unintegrated signatures:
PANTHER PTHR12763 1 110 0.0
PANTHER PTHR12763:SF26 1 110 0.0
Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. 25 110 -
Phobius SIGNAL_PEPTIDE Signal peptide region 1 24 -
Phobius SIGNAL_PEPTIDE_C_REGION C-terminal region of a signal peptide. 17 24 -
Phobius SIGNAL_PEPTIDE_H_REGION Hydrophobic region of a signal peptide. 5 16 -
Phobius SIGNAL_PEPTIDE_N_REGION N-terminal region of a signal peptide. 1 4 -
SignalP_EUK SignalP-noTM 1 17 -
SignalP_GRAM_NEGATIVE SignalP-noTM 1 17 -

InterPro
Clickable SVG
Courtesy of EMBL-EBI

Sequences (FASTA)