ARC Centre of Excellence for Plant Energy Biology

MPIC — PAM18 – Eucgr.A01173.1 InterPro Results

Sequences for Eucalyptus grandis were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.

Database Detected Description Start End E-Value
InterPro IPR001623 DnaJ domain:
Gene3D G3DSA:1.10.287.110 44 107 2.8E-19
Pfam PF00226 DnaJ domain 58 102 1.2E-5
SMART SM00271 DnaJ molecular chaperone homology domain 53 107 4.399999674E-6
SUPERFAMILY SSF46565 44 105 0.0
InterPro No IPR Unintegrated signatures:
PANTHER PTHR12763 4 112 0.0
PANTHER PTHR12763:SF26 4 112 0.0
Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. 19 112 -
Phobius SIGNAL_PEPTIDE Signal peptide region 1 18 -
Phobius SIGNAL_PEPTIDE_C_REGION C-terminal region of a signal peptide. 14 18 -
Phobius SIGNAL_PEPTIDE_H_REGION Hydrophobic region of a signal peptide. 2 13 -
Phobius SIGNAL_PEPTIDE_N_REGION N-terminal region of a signal peptide. 1 1 -
TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane. 4 23 -

InterPro
Clickable SVG
Courtesy of EMBL-EBI

Sequences (FASTA)