MPIC
Sequences for Brassica rapa were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.
| Database | Detected | Description | Start | End | E-Value |
|---|---|---|---|---|---|
| InterPro | IPR001623 | DnaJ domain: | |||
| Gene3D | G3DSA:1.10.287.110 | 46 | 110 | 1.3E-18 | |
| Pfam | PF00226 | DnaJ domain | 60 | 104 | 8.3E-5 |
| SMART | SM00271 | DnaJ molecular chaperone homology domain | 55 | 109 | 1.100000299E-5 |
| SUPERFAMILY | SSF46565 | 46 | 107 | 0.0 | |
| InterPro | No IPR | Unintegrated signatures: | |||
| PANTHER | PTHR12763 | 5 | 115 | 0.0 | |
| PANTHER | PTHR12763:SF26 | 5 | 115 | 0.0 | |
| Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 21 | 115 | - |
| Phobius | SIGNAL_PEPTIDE | Signal peptide region | 1 | 20 | - |
| Phobius | SIGNAL_PEPTIDE_C_REGION | C-terminal region of a signal peptide. | 16 | 20 | - |
| Phobius | SIGNAL_PEPTIDE_H_REGION | Hydrophobic region of a signal peptide. | 4 | 15 | - |
| Phobius | SIGNAL_PEPTIDE_N_REGION | N-terminal region of a signal peptide. | 1 | 3 | - |
| SignalP_GRAM_NEGATIVE | SignalP-noTM | 1 | 20 | - | |
