MPIC
Sequences for Brassica rapa were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.
| Database | Detected | Description | Start | End | E-Value |
|---|---|---|---|---|---|
| InterPro | IPR001623 | DnaJ domain: | |||
| Gene3D | G3DSA:1.10.287.110 | 73 | 136 | 7.0E-18 | |
| Pfam | PF00226 | DnaJ domain | 87 | 131 | 7.4E-5 |
| SMART | SM00271 | DnaJ molecular chaperone homology domain | 82 | 136 | 1.999999654E-4 |
| SUPERFAMILY | SSF46565 | 73 | 134 | 0.0 | |
| InterPro | No IPR | Unintegrated signatures: | |||
| PANTHER | PTHR12763 | 19 | 142 | 0.0 | |
| PANTHER | PTHR12763:SF26 | 19 | 142 | 0.0 | |
| Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | 59 | 142 | - |
| Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 27 | 35 | - |
| Phobius | SIGNAL_PEPTIDE | Signal peptide region | 1 | 26 | - |
| Phobius | SIGNAL_PEPTIDE_C_REGION | C-terminal region of a signal peptide. | 22 | 26 | - |
| Phobius | SIGNAL_PEPTIDE_H_REGION | Hydrophobic region of a signal peptide. | 10 | 21 | - |
| Phobius | SIGNAL_PEPTIDE_N_REGION | N-terminal region of a signal peptide. | 1 | 9 | - |
| Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 36 | 58 | - |
| TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 36 | 58 | - |
| TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 10 | 29 | - |
