ARC Centre of Excellence for Plant Energy Biology

MPIC — PAM17 Targeting Predictions

Computational targeting prediction programs were run en bloc for all included species using each algorithm’s default parameters applicable per species kingdom (Boden and Hawkins 2005; Claros 1995; Emanuelsson et al. 2000; Emanuelsson et al. 1999; Neuberger et al. 2003; Small et al. 2004).

Prediction Frequency
mTP 5
cTP 2

Abbreviations

cTP: chloroplast targeting peptide (plants only)
ER: endoplasmic reticulum
mTP: mitochrondrial targeting peptide
SP: signal peptide / secretory pathway

mTP predicted plus 1 other Species ChloroPMitoProt2PProwlerPredotarPTS1TargetP
gi|212645058|NP_493397.3|Protein W04A4.4 [Caenorhabditis elegans]|ref Species Caenorhabditis elegans Caenorhabditis elegans cTP
gi|85112693|hypothetical protein NCU00737 [Neurospora crassa OR74A]|ref|XP_964390.1 Species Neurospora crassa Neurospora crassa mTPcTPmTP
YKR065C Species Saccharomyces cerevisiae Saccharomyces cerevisiae mTPmTPmTP

Sequences (FASTA)