ARC Centre of Excellence for Plant Energy Biology

MPIC — PAM16 Transmembrane Helix Domain Predictions

Num_PredHel indicates the number of predicted transmembrane helix domains calculated by DAS and TMHMM predictors (for methods, see MPIC paper). A tally of both predictors is shown first.

Num_PredHel Frequency
1 15

1 predicted Species DAS_Num_PredHelTMHMM_Num_PredHel
AT3G59280 Species Arabidopsis thaliana Arabidopsis thaliana
AT5G61880 Species Arabidopsis thaliana Arabidopsis thaliana
Bra003369 Species Brassica rapa Brassica rapa
Bra007441 Species Brassica rapa Brassica rapa 1
Bra014546 Species Brassica rapa Brassica rapa 1
Bra019621 Species Brassica rapa Brassica rapa
gi|17553472 Species Caenorhabditis elegans Caenorhabditis elegans
CMK200CT Species Cyanidioschyzon merolae Cyanidioschyzon merolae
CMP334CT Species Cyanidioschyzon merolae Cyanidioschyzon merolae
A8J4S6_CHLRE|tr Species Chlamydomonas reinhardtii Chlamydomonas reinhardtii
Carubv10018261m.g Species Capsella rubella Capsella rubella
Cucsa.181450.1 Species Cucumis sativus Cucumis sativus
Cucsa.197950.1 Species Cucumis sativus Cucumis sativus
Eucgr.A00221.1 Species Eucalyptus grandis Eucalyptus grandis
Eucgr.H00433.1 Species Eucalyptus grandis Eucalyptus grandis
Eucgr.L00545.1 Species Eucalyptus grandis Eucalyptus grandis
Esi0237_0006 Species Ectocarpus siliculosus Ectocarpus siliculosus
Glyma02g08820.2 Species Glycine max Glycine max 1
Glyma06g20480.2 Species Glycine max Glycine max
Glyma16g27940.1 Species Glycine max Glycine max
gi|27363461 Species Homo sapiens Homo sapiens
Medtr1g098440.1 Species Medicago truncatula Medicago truncatula
Medtr4g116100.1 Species Medicago truncatula Medicago truncatula 1
gi|85097602 Species Neurospora crassa Neurospora crassa
LOC_Os10g33910.1 Species Oryza sativa Oryza sativa
Phpat.012G064600.1 Species Physcomitrella patens Physcomitrella patens
Phpat.018G069100.1 Species Physcomitrella patens Physcomitrella patens 1
Phpat.021G010400.1 Species Physcomitrella patens Physcomitrella patens 1
Potri.012G108600.1 Species Populus trichocarpa Populus trichocarpa
Potri.014G151200.1 Species Populus trichocarpa Populus trichocarpa
Potri.015G106600.1 Species Populus trichocarpa Populus trichocarpa 11
29964.m000153|29964.t000004 Species Ricinus communis Ricinus communis
YJL104W Species Saccharomyces cerevisiae Saccharomyces cerevisiae
402411 Species Selaginella moellendorffii Selaginella moellendorffii
76729 Species Selaginella moellendorffii Selaginella moellendorffii 1
PGSC0003DMG400014859|PGSC0003DMT400038494 Species Solanum tuberosum Solanum tuberosum
PGSC0003DMG400025578|PGSC0003DMT400065725 Species Solanum tuberosum Solanum tuberosum
PGSC0003DMG400029557|PGSC0003DMT400075993 Species Solanum tuberosum Solanum tuberosum 1
PGSC0003DMG400029559|PGSC0003DMT400076009 Species Solanum tuberosum Solanum tuberosum 1
D8TX81_VOLCA|tr Species Volvox carteri Volvox carteri 1
GSVIVG01008650001|GSVIVT01008650001 Species Vitis vinifera Vitis vinifera 11
GSVIVG01013542001|GSVIVT01013542001 Species Vitis vinifera Vitis vinifera 1
GRMZM2G048434_T07 Species Zea mays Zea mays
GRMZM2G164475_T01 Species Zea mays Zea mays

Sequences (FASTA)