MPIC
Putative and known regulatory elements within upstream regions of each gene were obtained from, and enable analysis of co-regulated genes sourced from, Athena: Arabidopsis thaliana a resource for rapid visualization and systematic analysis of Arabidopsis promoter sequences (O’Connor et al. 2005).
| Locus | Species | Motif | Pattern | Start | End | Sense | Sequence |
|---|---|---|---|---|---|---|---|
At3g59280  |
Arabidopsis thaliana | CARGCW8GAT | CWWWWWWWWG | -341 | -332 | + | CTTATTAAAG |
| At3g59280 |
Arabidopsis thaliana | CARGCW8GAT | CWWWWWWWWG | -341 | -332 | - | CTTATTAAAG |
| At3g59280 |
Arabidopsis thaliana | CCA1 binding site motif | AAMAATCT | -585 | -578 | - | AGATTGTT |
| At3g59280 |
Arabidopsis thaliana | MYB binding site promoter | MACCWAMC | -275 | -268 | + | AACCAAAC |
| At3g59280 |
Arabidopsis thaliana | MYB1AT | WAACCA | -276 | -271 | + | TAACCA |
| At3g59280 |
Arabidopsis thaliana | MYB1AT | WAACCA | -718 | -713 | - | TGGTTT |
| At3g59280 |
Arabidopsis thaliana | MYB4 binding site motif | AMCWAMC | -274 | -268 | + | ACCAAAC |
| At3g59280 |
Arabidopsis thaliana | MYB4 binding site motif | AMCWAMC | -580 | -574 | - | GTTTGTT |
| At3g59280 |
Arabidopsis thaliana | TATA-box Motif | TATAAA | -324 | -319 | - | TTTATA |
| At3g59280 |
Arabidopsis thaliana | TATA-box Motif | TATAAA | -372 | -367 | - | TTTATA |
| At3g59280 |
Arabidopsis thaliana | TATA-box Motif | TATAAA | -503 | -498 | + | TATAAA |
| At3g59280 |
Arabidopsis thaliana | W-box promoter motif | TTGACY | -125 | -120 | - | GGTCAA |
| At3g59280 |
Arabidopsis thaliana | Z-box promoter motif | ATACGTGT | -60 | -53 | + | ATACGTGT |
| At5g61880 |
Arabidopsis thaliana | ATHB2 binding site motif | TAATMATTA | -348 | -340 | - | TAATGATTA |
| At5g61880 |
Arabidopsis thaliana | BoxII promoter motif | GGTTAA | -342 | -337 | - | TTAACC |
| At5g61880 |
Arabidopsis thaliana | CARGCW8GAT | CWWWWWWWWG | -473 | -464 | + | CTTTAATAAG |
| At5g61880 |
Arabidopsis thaliana | CARGCW8GAT | CWWWWWWWWG | -473 | -464 | - | CTTTAATAAG |
| At5g61880 |
Arabidopsis thaliana | DRE core motif | RCCGAC | -51 | -46 | - | GTCGGT |
| At5g61880 |
Arabidopsis thaliana | DREB1A /CBF3 | RCCGACNT | -53 | -46 | - | ACGTCGGT |
| At5g61880 |
Arabidopsis thaliana | GAREAT | TAACAAR | -414 | -408 | - | TTTGTTA |
| At5g61880 |
Arabidopsis thaliana | MYB1AT | WAACCA | -341 | -336 | + | TAACCA |
| At5g61880 |
Arabidopsis thaliana | RAV1-B binding site motif | CACCTG | -24 | -19 | + | CACCTG |
| At5g61880 |
Arabidopsis thaliana | T-box promoter motif | ACTTTG | -192 | -187 | - | CAAAGT |
| At5g61880 |
Arabidopsis thaliana | TATA-box Motif | TATAAA | -102 | -97 | + | TATAAA |
| At5g61880 |
Arabidopsis thaliana | TATA-box Motif | TATAAA | -104 | -99 | - | TTTATA |
