ARC Centre of Excellence for Plant Energy Biology

MPIC — PAM16 – GSVIVG01013542001 InterPro Results

Sequences for Vitis vinifera were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.

Database Detected Description Start End E-Value
InterPro IPR002885 Pentatricopeptide repeat:
Pfam PF01535 PPR repeat 24 49 7.1E-5
Pfam PF01535 PPR repeat 60 87 0.21
Pfam PF01535 PPR repeat 98 121 0.2
ProSiteProfiles PS51375 Pentatricopeptide (PPR) repeat profile. 21 57 0.0
ProSiteProfiles PS51375 Pentatricopeptide (PPR) repeat profile. 94 128 0.0
ProSiteProfiles PS51375 Pentatricopeptide (PPR) repeat profile. 58 88 0.0
TIGRFAM TIGR00756 PPR: pentatricopeptide repeat domain 24 49 0.0028
InterPro No IPR Unintegrated signatures:
PANTHER PTHR24015 13 128 0.0
PANTHER PTHR24015:SF400 13 128 0.0
Pfam PF03656 Pam16 142 241 1.8E-18

InterPro
Clickable SVG
Courtesy of EMBL-EBI

Sequences (FASTA)