ARC Centre of Excellence for Plant Energy Biology

MPIC — OXA1 Transmembrane Helix Domain Predictions

Num_PredHel indicates the number of predicted transmembrane helix domains calculated by DAS and TMHMM predictors (for methods, see MPIC paper). A tally of both predictors is shown first.

Num_PredHel Frequency
1 16
2 5
3 23
4 107
5 24
6 1

4 predicted Species DAS_Num_PredHelTMHMM_Num_PredHel
AT1G24490 Species Arabidopsis thaliana Arabidopsis thaliana 44
AT2G46470 Species Arabidopsis thaliana Arabidopsis thaliana 53
AT5G62050 Species Arabidopsis thaliana Arabidopsis thaliana 51
Bra000424 Species Brassica rapa Brassica rapa 44
Bra004536 Species Brassica rapa Brassica rapa 21
Bra010053 Species Brassica rapa Brassica rapa 62
Bra012507 Species Brassica rapa Brassica rapa 44
Bra032799 Species Brassica rapa Brassica rapa 44
Bra035669 Species Brassica rapa Brassica rapa 44
Bra040305 Species Brassica rapa Brassica rapa 2
Bra040348 Species Brassica rapa Brassica rapa 33
Bra040623 Species Brassica rapa Brassica rapa 11
gi|71980488 Species Caenorhabditis elegans Caenorhabditis elegans 34
CMC118CT Species Cyanidioschyzon merolae Cyanidioschyzon merolae 33
CMT063CT Species Cyanidioschyzon merolae Cyanidioschyzon merolae 51
Cre06.g251900.t1.2 Species Chlamydomonas reinhardtii Chlamydomonas reinhardtii 52
Cre16.g690200.t1.2 Species Chlamydomonas reinhardtii Chlamydomonas reinhardtii 44
Cre17.g729800.t1.2 Species Chlamydomonas reinhardtii Chlamydomonas reinhardtii 4
Carubv10009320m.g Species Capsella rubella Capsella rubella 54
Carubv10016975m.g Species Capsella rubella Capsella rubella 42
Carubv10023172m.g Species Capsella rubella Capsella rubella 44
Carubv10023251m.g Species Capsella rubella Capsella rubella 53
Carubv10026454m.g Species Capsella rubella Capsella rubella 43
Cucsa.107400.1 Species Cucumis sativus Cucumis sativus 44
Cucsa.213790.1 Species Cucumis sativus Cucumis sativus 44
Cucsa.394650.1 Species Cucumis sativus Cucumis sativus 44
gi|268637951 Species Dictyostelium discoideum Dictyostelium discoideum 44
gi|66811452 Species Dictyostelium discoideum Dictyostelium discoideum 44
Eucgr.B01387.1 Species Eucalyptus grandis Eucalyptus grandis 54
Eucgr.B02380.1 Species Eucalyptus grandis Eucalyptus grandis 44
Eucgr.B03237.1 Species Eucalyptus grandis Eucalyptus grandis 44
Eucgr.E00058.1 Species Eucalyptus grandis Eucalyptus grandis 51
Eucgr.E00060.1 Species Eucalyptus grandis Eucalyptus grandis 41
Eucgr.E00860.1 Species Eucalyptus grandis Eucalyptus grandis 54
Esi0025_0161 Species Ectocarpus siliculosus Ectocarpus siliculosus 44
Esi0028_0040 Species Ectocarpus siliculosus Ectocarpus siliculosus 44
Alb3 homolog|Esi0099_0095 Species Ectocarpus siliculosus Ectocarpus siliculosus 41
Esi0170_0057 Species Ectocarpus siliculosus Ectocarpus siliculosus 44
Alb3 homolog|Esi0227_0023 Species Ectocarpus siliculosus Ectocarpus siliculosus 51
Glyma07g31320.1 Species Glycine max Glycine max 5
Glyma07g36311.1 Species Glycine max Glycine max 54
Glyma11g14960.1 Species Glycine max Glycine max 44
Glyma11g37590.1 Species Glycine max Glycine max 44
Glyma12g06920.1 Species Glycine max Glycine max 44
Glyma13g25140.2 Species Glycine max Glycine max 5
Glyma18g01540.1 Species Glycine max Glycine max 44
Glyma18g47545.1 Species Glycine max Glycine max 54
gi|223718097 Species Homo sapiens Homo sapiens 54
gi|28395049 Species Homo sapiens Homo sapiens 43
Medtr3g086250.1 Species Medicago truncatula Medicago truncatula 44
Medtr7g036950.1 Species Medicago truncatula Medicago truncatula 53
gi|85104274 Species Neurospora crassa Neurospora crassa 54
LOC_Os01g05800.1 Species Oryza sativa Oryza sativa 41
LOC_Os03g02480.1 Species Oryza sativa Oryza sativa 54
LOC_Os03g62750.1 Species Oryza sativa Oryza sativa 4
LOC_Os10g37690.1 Species Oryza sativa Oryza sativa 54
Phpat.003G132900.1 Species Physcomitrella patens Physcomitrella patens 54
Phpat.008G051300.1 Species Physcomitrella patens Physcomitrella patens 44
Phpat.010G066400.1 Species Physcomitrella patens Physcomitrella patens 54
Phpat.011G106700.1 Species Physcomitrella patens Physcomitrella patens 44
Potri.001G091800.1 Species Populus trichocarpa Populus trichocarpa 44
Potri.001G237800.1 Species Populus trichocarpa Populus trichocarpa 43
Potri.003G139800.1 Species Populus trichocarpa Populus trichocarpa 1
Potri.006G073000.1 Species Populus trichocarpa Populus trichocarpa 4
Potri.008G182000.1 Species Populus trichocarpa Populus trichocarpa 44
Potri.009G029100.1 Species Populus trichocarpa Populus trichocarpa 43
Potri.010G051900.1 Species Populus trichocarpa Populus trichocarpa 44
Potri.018G140100.1 Species Populus trichocarpa Populus trichocarpa 4
Potri.T145700.1 Species Populus trichocarpa Populus trichocarpa 4
29651.m000289|29651.t000009 Species Ricinus communis Ricinus communis 53
29876.m000246|29876.t000003 Species Ricinus communis Ricinus communis 44
29929.m004771|29929.t000274 Species Ricinus communis Ricinus communis 44
30128.m009019|30128.t000480 Species Ricinus communis Ricinus communis 44
30190.m010832|30190.t000068 Species Ricinus communis Ricinus communis 44
YER154W Species Saccharomyces cerevisiae Saccharomyces cerevisiae 31
12954 Species Selaginella moellendorffii Selaginella moellendorffii 43
73518 Species Selaginella moellendorffii Selaginella moellendorffii 44
PGSC0003DMG400000401|PGSC0003DMT400001063 Species Solanum tuberosum Solanum tuberosum 44
PGSC0003DMG400005839|PGSC0003DMT400014957 Species Solanum tuberosum Solanum tuberosum 34
PGSC0003DMG400010740|PGSC0003DMT400027902 Species Solanum tuberosum Solanum tuberosum 44
Vocar20001462m.g Species Volvox carteri Volvox carteri 45
Vocar20003543m.g Species Volvox carteri Volvox carteri 3
Vocar20010438m.g Species Volvox carteri Volvox carteri 44
GSVIVG01000594001|GSVIVT01000594001 Species Vitis vinifera Vitis vinifera 44
GSVIVG01019145001|GSVIVT01019145001 Species Vitis vinifera Vitis vinifera 44
GSVIVG01019529001|GSVIVT01019529001 Species Vitis vinifera Vitis vinifera 43
GSVIVG01024995001|GSVIVT01024995001 Species Vitis vinifera Vitis vinifera 43
GRMZM2G055880_T01 Species Zea mays Zea mays 43
GRMZM2G064804_T02 Species Zea mays Zea mays 54
GRMZM2G110063_T01 Species Zea mays Zea mays 31
GRMZM2G136854_T01 Species Zea mays Zea mays 11
GRMZM2G426200_T01 Species Zea mays Zea mays 33
GRMZM5G839422_T01 Species Zea mays Zea mays 41

Sequences (FASTA)