ARC Centre of Excellence for Plant Energy Biology

MPIC — OXA1 Athena Promoter Motif Predictions

Putative and known regulatory elements within upstream regions of each gene were obtained from, and enable analysis of co-regulated genes sourced from, Athena: Arabidopsis thaliana a resource for rapid visualization and systematic analysis of Arabidopsis promoter sequences (O’Connor et al. 2005).

Locus Species Motif Pattern Start End Sense Sequence
At1g24490 Species Arabidopsis thaliana Arabidopsis thaliana CARGCW8GATCWWWWWWWWG-573-564+CAAATTATTG
At1g24490 Species Arabidopsis thaliana Arabidopsis thaliana CARGCW8GATCWWWWWWWWG-573-564-CAAATTATTG
At1g24490 Species Arabidopsis thaliana Arabidopsis thaliana L1-box promoter motifTAAATGYA-92-85+TAAATGTA
At1g24490 Species Arabidopsis thaliana Arabidopsis thaliana MYB1ATWAACCA-543-538-TGGTTT
At1g24490 Species Arabidopsis thaliana Arabidopsis thaliana MYB4 binding site motifAMCWAMC-262-256-GTTTGTT
At1g24490 Species Arabidopsis thaliana Arabidopsis thaliana SV40 core promoter motifGTGGWWHG-320-313-CGATCCAC
At1g24490 Species Arabidopsis thaliana Arabidopsis thaliana TATA-box MotifTATAAA-349-344+TATAAA
At1g24490 Species Arabidopsis thaliana Arabidopsis thaliana TATA-box MotifTATAAA-351-346-TTTATA
At1g24490 Species Arabidopsis thaliana Arabidopsis thaliana TATA-box MotifTATAAA-40-35+TATAAA
At1g24490 Species Arabidopsis thaliana Arabidopsis thaliana W-box promoter motifTTGACY-462-457-AGTCAA
At1g24490 Species Arabidopsis thaliana Arabidopsis thaliana W-box promoter motifTTGACY-514-509+TTGACC
At2g46470 Species Arabidopsis thaliana Arabidopsis thaliana AGCBOXNPGLBAGCCGCC-137-131-GGCGGCT
At2g46470 Species Arabidopsis thaliana Arabidopsis thaliana CDA1ATCAB2CAAAACGC-40-33-GCGTTTTG
At2g46470 Species Arabidopsis thaliana Arabidopsis thaliana GCC-box promoter motifGCCGCC-137-132-GGCGGC
At2g46470 Species Arabidopsis thaliana Arabidopsis thaliana MYB2ATTAACTG-84-79+TAACTG
At2g46470 Species Arabidopsis thaliana Arabidopsis thaliana TATA-box MotifTATAAA-255-250-TTTATA
At2g46470 Species Arabidopsis thaliana Arabidopsis thaliana W-box promoter motifTTGACY-122-117+TTGACT
At5g62050 Species Arabidopsis thaliana Arabidopsis thaliana AtMYC2 BS in RD22CACATG-168-163+CACATG
At5g62050 Species Arabidopsis thaliana Arabidopsis thaliana MYB binding site promoterMACCWAMC-77-70+AACCAAAC
At5g62050 Species Arabidopsis thaliana Arabidopsis thaliana MYB1ATWAACCA-59-54+AAACCA
At5g62050 Species Arabidopsis thaliana Arabidopsis thaliana MYB1ATWAACCA-78-73+AAACCA
At5g62050 Species Arabidopsis thaliana Arabidopsis thaliana MYB4 binding site motifAMCWAMC-223-217+AACAAAC
At5g62050 Species Arabidopsis thaliana Arabidopsis thaliana MYB4 binding site motifAMCWAMC-76-70+ACCAAAC
At5g62050 Species Arabidopsis thaliana Arabidopsis thaliana MYCATERD1CATGTG-168-163-CACATG
At5g62050 Species Arabidopsis thaliana Arabidopsis thaliana TATA-box MotifTATAAA-81-76+TATAAA
At5g62050 Species Arabidopsis thaliana Arabidopsis thaliana TATA-box MotifTATAAA-83-78-TTTATA
At5g62050 Species Arabidopsis thaliana Arabidopsis thaliana W-box promoter motifTTGACY-110-105-AGTCAA

Sequences (FASTA)