MPIC
Sequences for Populus trichocarpa were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.
| Database | Detected | Description | Start | End | E-Value |
|---|---|---|---|---|---|
| InterPro | IPR001708 | Membrane insertase OXA1/ALB3/YidC: | |||
| PANTHER | PTHR12428 | 69 | 450 | 0.0 | |
| Pfam | PF02096 | 60Kd inner membrane protein | 133 | 347 | 9.4E-58 |
| InterPro | IPR028055 | Membrane insertase YidC/Oxa1, C-terminal: | |||
| TIGRFAM | TIGR03592 | yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family | 133 | 347 | 5.8E-53 |
| InterPro | No IPR | Unintegrated signatures: | |||
| Coils | Coil | 401 | 436 | - | |
| PANTHER | PTHR12428:SF18 | 69 | 450 | 0.0 | |
| Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | 153 | 189 | - |
| Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | 292 | 310 | - |
| Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 333 | 509 | - |
| Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 1 | 130 | - |
| Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 214 | 271 | - |
| Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 311 | 332 | - |
| Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 190 | 213 | - |
| Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 272 | 291 | - |
| Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 131 | 152 | - |
| TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 311 | 333 | - |
| TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 193 | 215 | - |
| TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 129 | 151 | - |
| TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 266 | 288 | - |
