MPIC
Sequences for Oryza sativa were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.
| Database | Detected | Description | Start | End | E-Value |
|---|---|---|---|---|---|
| InterPro | IPR001708 | Membrane insertase OXA1/ALB3/YidC: | |||
| PANTHER | PTHR12428 | 64 | 441 | 0.0 | |
| Pfam | PF02096 | 60Kd inner membrane protein | 136 | 351 | 1.2E-60 |
| InterPro | IPR028055 | Membrane insertase YidC/Oxa1, C-terminal: | |||
| TIGRFAM | TIGR03592 | yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family | 136 | 350 | 2.0E-55 |
| InterPro | No IPR | Unintegrated signatures: | |||
| PANTHER | PTHR12428:SF18 | 64 | 441 | 0.0 | |
| Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | 292 | 310 | - |
| Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | 157 | 202 | - |
| Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 224 | 269 | - |
| Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 337 | 460 | - |
| Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 21 | 134 | - |
| Phobius | SIGNAL_PEPTIDE | Signal peptide region | 1 | 20 | - |
| Phobius | SIGNAL_PEPTIDE_C_REGION | C-terminal region of a signal peptide. | 16 | 20 | - |
| Phobius | SIGNAL_PEPTIDE_H_REGION | Hydrophobic region of a signal peptide. | 4 | 15 | - |
| Phobius | SIGNAL_PEPTIDE_N_REGION | N-terminal region of a signal peptide. | 1 | 3 | - |
| Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 311 | 336 | - |
| Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 270 | 291 | - |
| Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 203 | 223 | - |
| Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 135 | 156 | - |
| SignalP_GRAM_POSITIVE | SignalP-TM | 1 | 20 | - | |
| TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 320 | 342 | - |
