MPIC
Sequences for Capsella rubella were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.
| Database | Detected | Description | Start | End | E-Value |
|---|---|---|---|---|---|
| InterPro | IPR001708 | Membrane insertase OXA1/ALB3/YidC: | |||
| PANTHER | PTHR12428 | 71 | 427 | 0.0 | |
| Pfam | PF02096 | 60Kd inner membrane protein | 139 | 353 | 1.8E-59 |
| InterPro | IPR028055 | Membrane insertase YidC/Oxa1, C-terminal: | |||
| TIGRFAM | TIGR03592 | yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family | 139 | 352 | 5.2E-55 |
| InterPro | No IPR | Unintegrated signatures: | |||
| PANTHER | PTHR12428:SF18 | 71 | 427 | 0.0 | |
| Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | 159 | 204 | - |
| Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | 294 | 312 | - |
| Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 226 | 271 | - |
| Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 339 | 460 | - |
| Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 1 | 136 | - |
| Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 137 | 158 | - |
| Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 205 | 225 | - |
| Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 313 | 338 | - |
| Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 272 | 293 | - |
| TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 133 | 155 | - |
| TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 200 | 222 | - |
| TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 272 | 294 | - |
| TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 315 | 337 | - |
