MPIC
Sequences for Brassica rapa were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.
| Database | Detected | Description | Start | End | E-Value |
|---|---|---|---|---|---|
| InterPro | IPR001708 | Membrane insertase OXA1/ALB3/YidC: | |||
| PANTHER | PTHR12428 | 58 | 426 | 0.0 | |
| Pfam | PF02096 | 60Kd inner membrane protein | 127 | 341 | 2.4E-60 |
| InterPro | IPR028055 | Membrane insertase YidC/Oxa1, C-terminal: | |||
| TIGRFAM | TIGR03592 | yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family | 127 | 340 | 1.2E-55 |
| InterPro | No IPR | Unintegrated signatures: | |||
| PANTHER | PTHR12428:SF18 | 58 | 426 | 0.0 | |
| Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | 282 | 300 | - |
| Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | 147 | 192 | - |
| Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 327 | 447 | - |
| Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 214 | 259 | - |
| Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 1 | 124 | - |
| Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 193 | 213 | - |
| Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 260 | 281 | - |
| Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 301 | 326 | - |
| Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 125 | 146 | - |
| TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 123 | 145 | - |
| TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 188 | 210 | - |
| TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 260 | 282 | - |
| TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 303 | 325 | - |
