ARC Centre of Excellence for Plant Energy Biology

MPIC — OOP,PRD1,OCT1,OCT1-1,OCT1-2 Transmembrane Helix Domain Predictions

Num_PredHel indicates the number of predicted transmembrane helix domains calculated by DAS and TMHMM predictors (for methods, see MPIC paper). A tally of both predictors is shown first.

Num_PredHel Frequency
1 41
2 1

1 predicted Species DAS_Num_PredHelTMHMM_Num_PredHel
AT1G67690 Species Arabidopsis thaliana Arabidopsis thaliana 11
AT5G51540 Species Arabidopsis thaliana Arabidopsis thaliana
AT5G65620 Species Arabidopsis thaliana Arabidopsis thaliana
Bra004078 Species Brassica rapa Brassica rapa 11
Bra004244 Species Brassica rapa Brassica rapa 11
Bra006067 Species Brassica rapa Brassica rapa
Bra024401 Species Brassica rapa Brassica rapa
Bra028579 Species Brassica rapa Brassica rapa
Bra029169 Species Brassica rapa Brassica rapa
gi|32565901 Species Caenorhabditis elegans Caenorhabditis elegans
gi|71999758 Species Caenorhabditis elegans Caenorhabditis elegans
CMS132CT Species Cyanidioschyzon merolae Cyanidioschyzon merolae
CMS446CT Species Cyanidioschyzon merolae Cyanidioschyzon merolae 11
Cre02.g073400.t1.3 Species Chlamydomonas reinhardtii Chlamydomonas reinhardtii
Cre13.g572900.t2.1 Species Chlamydomonas reinhardtii Chlamydomonas reinhardtii
Carubv10000350m.g Species Capsella rubella Capsella rubella
Carubv10019853m.g Species Capsella rubella Capsella rubella 21
Carubv10025914m.g Species Capsella rubella Capsella rubella
Carubv10025983m.g Species Capsella rubella Capsella rubella
Cucsa.251510.1 Species Cucumis sativus Cucumis sativus
Cucsa.273340.1 Species Cucumis sativus Cucumis sativus 11
Cucsa.394790.1 Species Cucumis sativus Cucumis sativus 11
gi|268637658 Species Dictyostelium discoideum Dictyostelium discoideum
gi|66801567 Species Dictyostelium discoideum Dictyostelium discoideum
Eucgr.B03454.1 Cs Species Eucalyptus grandis Eucalyptus grandis 11
Eucgr.I00594.1 Species Eucalyptus grandis Eucalyptus grandis
Eucgr.I00597.1 Species Eucalyptus grandis Eucalyptus grandis
Eucgr.K00152.1 Species Eucalyptus grandis Eucalyptus grandis
Eucgr.L02517.1 Species Eucalyptus grandis Eucalyptus grandis
Esi0023_0135 Species Ectocarpus siliculosus Ectocarpus siliculosus
Esi0033_0093 Species Ectocarpus siliculosus Ectocarpus siliculosus
Glyma01g02480.1 Species Glycine max Glycine max 1
Glyma04g13088.1 Species Glycine max Glycine max
Glyma09g33490.1 Species Glycine max Glycine max 11
Glyma11g37410.2 Species Glycine max Glycine max 11
Glyma18g01380.1 Species Glycine max Glycine max 11
gi|14149738|NP_065777|ref Species Homo sapiens Homo sapiens
gi|4507491 Species Homo sapiens Homo sapiens
Medtr3g009160.1 Species Medicago truncatula Medicago truncatula
Medtr3g086000.1 Species Medicago truncatula Medicago truncatula 11
Medtr5g030940.1 Species Medicago truncatula Medicago truncatula
gi|85107353 Species Neurospora crassa Neurospora crassa 1
gi|85111610 Species Neurospora crassa Neurospora crassa
LOC_Os01g67590.1 Species Oryza sativa Oryza sativa 11
LOC_Os02g58340.1 Species Oryza sativa Oryza sativa
LOC_Os06g47210.1 Species Oryza sativa Oryza sativa
Phpat.016G041000.1 Species Physcomitrella patens Physcomitrella patens
Phpat.018G066900.1 Species Physcomitrella patens Physcomitrella patens
Phpat.019G060600.1 Species Physcomitrella patens Physcomitrella patens 1
Potri.007G004600.1 Species Populus trichocarpa Populus trichocarpa
Potri.010G054500.1 Species Populus trichocarpa Populus trichocarpa 11
Potri.014G004600.1 Species Populus trichocarpa Populus trichocarpa 11
Potri.014G010100.1 Species Populus trichocarpa Populus trichocarpa 1
Potri.015G129300.1 Species Populus trichocarpa Populus trichocarpa
28333.m000566|28333.t000012 Species Ricinus communis Ricinus communis
28658.m000032|28658.t000001 Species Ricinus communis Ricinus communis
29929.m004709|29929.t000212 Species Ricinus communis Ricinus communis 11
30147.m014196|30147.t000467 Species Ricinus communis Ricinus communis
30484.m000014|30484.t000001 Species Ricinus communis Ricinus communis
YCL057W Species Saccharomyces cerevisiae Saccharomyces cerevisiae
Oct1|YKL134C Species Saccharomyces cerevisiae Saccharomyces cerevisiae
119899 Species Selaginella moellendorffii Selaginella moellendorffii
164651 Species Selaginella moellendorffii Selaginella moellendorffii
416778 Species Selaginella moellendorffii Selaginella moellendorffii
439159 Species Selaginella moellendorffii Selaginella moellendorffii
85692 Species Selaginella moellendorffii Selaginella moellendorffii
97030 Species Selaginella moellendorffii Selaginella moellendorffii
97633 Species Selaginella moellendorffii Selaginella moellendorffii
PGSC0003DMG400030613|PGSC0003DMT400078667 Species Solanum tuberosum Solanum tuberosum 11
M1C3Y6_SOLTU|tr Species Solanum tuberosum Solanum tuberosum
Vocar20008539m.g Species Volvox carteri Volvox carteri
Vocar20013694m.g Species Volvox carteri Volvox carteri
GSVIVG01003850001|GSVIVT01003850001 Species Vitis vinifera Vitis vinifera
GSVIVG01010319001|GSVIVT01010319001 Species Vitis vinifera Vitis vinifera 11
GSVIVG01018572001|GSVIVT01018572001 Species Vitis vinifera Vitis vinifera
GSVIVG01031425001|GSVIVT01031425001 Species Vitis vinifera Vitis vinifera
GRMZM2G133919_T01 Species Zea mays Zea mays 11
GRMZM2G450659_T01 Species Zea mays Zea mays

Sequences (FASTA)