MPIC
Putative and known regulatory elements within upstream regions of each gene were obtained from, and enable analysis of co-regulated genes sourced from, Athena: Arabidopsis thaliana a resource for rapid visualization and systematic analysis of Arabidopsis promoter sequences (O’Connor et al. 2005).
| Locus | Species | Motif | Pattern | Start | End | Sense | Sequence |
|---|---|---|---|---|---|---|---|
At1g67690  |
Arabidopsis thaliana | ARF binding site motif | TGTCTC | -103 | -98 | + | TGTCTC |
| At1g67690 |
Arabidopsis thaliana | ARF binding site motif | TGTCTC | -215 | -210 | + | TGTCTC |
| At1g67690 |
Arabidopsis thaliana | CARGCW8GAT | CWWWWWWWWG | -524 | -515 | + | CAAATTAATG |
| At1g67690 |
Arabidopsis thaliana | CARGCW8GAT | CWWWWWWWWG | -524 | -515 | - | CAAATTAATG |
| At1g67690 |
Arabidopsis thaliana | CCA1 binding site motif | AAMAATCT | -120 | -113 | - | AGATTTTT |
| At1g67690 |
Arabidopsis thaliana | MYB1AT | WAACCA | -246 | -241 | + | AAACCA |
| At1g67690 |
Arabidopsis thaliana | MYB1AT | WAACCA | -421 | -416 | + | AAACCA |
| At1g67690 |
Arabidopsis thaliana | SV40 core promoter motif | GTGGWWHG | -247 | -240 | - | CAAACCAC |
| At1g67690 |
Arabidopsis thaliana | T-box promoter motif | ACTTTG | -253 | -248 | - | CAAAGT |
| At1g67690 |
Arabidopsis thaliana | TATA-box Motif | TATAAA | -275 | -270 | - | TTTATA |
| At1g67690 |
Arabidopsis thaliana | TATA-box Motif | TATAAA | -509 | -504 | - | TTTATA |
| At1g67690 |
Arabidopsis thaliana | W-box promoter motif | TTGACY | -250 | -245 | - | AGTCAA |
| At1g67690 |
Arabidopsis thaliana | W-box promoter motif | TTGACY | -333 | -328 | + | TTGACC |
| At5g65620 |
Arabidopsis thaliana | ACGTABREMOTIFA2OSEM | ACGTGKC | -452 | -446 | + | ACGTGTC |
| At5g65620 |
Arabidopsis thaliana | AtMYB2 BS in RD22 | CTAACCA | -263 | -257 | + | CTAACCA |
| At5g65620 |
Arabidopsis thaliana | BoxII promoter motif | GGTTAA | -281 | -276 | + | GGTTAA |
| At5g65620 |
Arabidopsis thaliana | BoxII promoter motif | GGTTAA | -824 | -819 | + | GGTTAA |
| At5g65620 |
Arabidopsis thaliana | CCA1 binding site motif | AAMAATCT | -77 | -70 | + | AAAAATCT |
| At5g65620 |
Arabidopsis thaliana | GADOWNAT | ACGTGTC | -452 | -446 | + | ACGTGTC |
| At5g65620 |
Arabidopsis thaliana | Gap-box Motif | CAAATGAA | -682 | -675 | - | TTCATTTG |
| At5g65620 |
Arabidopsis thaliana | GAREAT | TAACAAR | -239 | -233 | - | TTTGTTA |
| At5g65620 |
Arabidopsis thaliana | MYB binding site promoter | MACCWAMC | -623 | -616 | - | GTTTGGTT |
| At5g65620 |
Arabidopsis thaliana | MYB1AT | WAACCA | -262 | -257 | + | TAACCA |
| At5g65620 |
Arabidopsis thaliana | MYB1AT | WAACCA | -282 | -277 | - | TGGTTA |
| At5g65620 |
Arabidopsis thaliana | MYB1AT | WAACCA | -549 | -544 | - | TGGTTT |
| At5g65620 |
Arabidopsis thaliana | MYB1AT | WAACCA | -620 | -615 | - | TGGTTT |
| At5g65620 |
Arabidopsis thaliana | MYB1AT | WAACCA | -825 | -820 | - | TGGTTA |
| At5g65620 |
Arabidopsis thaliana | MYB1AT | WAACCA | -831 | -826 | - | TGGTTA |
| At5g65620 |
Arabidopsis thaliana | MYB4 binding site motif | AMCWAMC | -443 | -437 | - | GTTTGTT |
| At5g65620 |
Arabidopsis thaliana | MYB4 binding site motif | AMCWAMC | -623 | -617 | - | GTTTGGT |
| At5g65620 |
Arabidopsis thaliana | MYB4 binding site motif | AMCWAMC | -693 | -687 | + | ACCTACC |
| At5g65620 |
Arabidopsis thaliana | T-box promoter motif | ACTTTG | -134 | -129 | + | ACTTTG |
| At5g65620 |
Arabidopsis thaliana | T-box promoter motif | ACTTTG | -860 | -855 | - | CAAAGT |
| At5g65620 |
Arabidopsis thaliana | TATA-box Motif | TATAAA | -604 | -599 | + | TATAAA |
| At5g65620 |
Arabidopsis thaliana | TATA-box Motif | TATAAA | -908 | -903 | - | TTTATA |
| At5g65620 |
Arabidopsis thaliana | UPRMOTIFIIAT | CCNNNNNNNNNNNNCCACG | -513 | -495 | - | CGTGGTCGTAGTATTTGGG |
| At5g65620 |
Arabidopsis thaliana | W-box promoter motif | TTGACY | -181 | -176 | + | TTGACT |
| At5g65620 |
Arabidopsis thaliana | W-box promoter motif | TTGACY | -718 | -713 | - | AGTCAA |
| At5g65620 |
Arabidopsis thaliana | W-box promoter motif | TTGACY | -94 | -89 | - | AGTCAA |
