ARC Centre of Excellence for Plant Energy Biology

MPIC — OOP,PRD1,OCT1,OCT1-1,OCT1-2 – PGSC0003DMG400030613 InterPro Results

Sequences for Solanum tuberosum were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.

Database Detected Description Start End E-Value
InterPro IPR001567 Peptidase M3A/M3B:
Pfam PF01432 Peptidase family M3 345 805 2.8E-134
InterPro IPR024077 Neurolysin/Thimet oligopeptidase, domain 2:
Gene3D G3DSA:1.10.1370.10 256 468 5.900000005E-148
Gene3D G3DSA:1.10.1370.10 629 806 5.900000005E-148
InterPro IPR024079 Metallopeptidase, catalytic domain:
Gene3D G3DSA:3.40.390.10 477 628 9.1E-53
InterPro IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal:
Gene3D G3DSA:1.20.1050.40 128 252 3.6E-20
InterPro No IPR Unintegrated signatures:
Coils Coil 401 422 -
Coils Coil 261 282 -
PANTHER PTHR11804 61 809 0.0
PANTHER PTHR11804:SF39 61 809 0.0
Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. 42 811 -
Phobius SIGNAL_PEPTIDE Signal peptide region 1 41 -
Phobius SIGNAL_PEPTIDE_C_REGION C-terminal region of a signal peptide. 34 41 -
Phobius SIGNAL_PEPTIDE_H_REGION Hydrophobic region of a signal peptide. 22 33 -
Phobius SIGNAL_PEPTIDE_N_REGION N-terminal region of a signal peptide. 1 21 -
SUPERFAMILY SSF55486 119 805 0.0
TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane. 13 35 -

InterPro
Clickable SVG
Courtesy of EMBL-EBI

Sequences (FASTA)