ARC Centre of Excellence for Plant Energy Biology

MPIC — OOP,PRD1,OCT1,OCT1-1,OCT1-2 – Medtr5g030940.1 InterPro Results

Sequences for Medicago truncatula were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.

Database Detected Description Start End E-Value
InterPro IPR001567 Peptidase M3A/M3B:
Pfam PF01432 Peptidase family M3 322 782 1.4E-137
InterPro IPR024077 Neurolysin/Thimet oligopeptidase, domain 2:
Gene3D G3DSA:1.10.1370.10 606 788 1.299999999E-152
Gene3D G3DSA:1.10.1370.10 233 445 1.299999999E-152
InterPro IPR024079 Metallopeptidase, catalytic domain:
Gene3D G3DSA:3.40.390.10 454 605 2.1E-52
InterPro IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal:
Gene3D G3DSA:1.20.1050.40 106 229 9.199999999E-18
InterPro No IPR Unintegrated signatures:
Coils Coil 238 259 -
Coils Coil 172 193 -
Coils Coil 117 138 -
Coils Coil 378 399 -
Coils Coil 931 966 -
PANTHER PTHR11804 94 797 0.0
PANTHER PTHR11804:SF39 94 797 0.0
Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. 19 971 -
Phobius SIGNAL_PEPTIDE Signal peptide region 1 18 -
Phobius SIGNAL_PEPTIDE_C_REGION C-terminal region of a signal peptide. 14 18 -
Phobius SIGNAL_PEPTIDE_H_REGION Hydrophobic region of a signal peptide. 5 13 -
Phobius SIGNAL_PEPTIDE_N_REGION N-terminal region of a signal peptide. 1 4 -
ProDom PD593487 RIKEN BRICK1 COIL CYTOSKELETON COILED PRODUCT:HYPOTHETICAL FULL EMBRYO CDNA ENRICHED 903 960 0.0
SUPERFAMILY SSF55486 97 782 0.0

InterPro
Clickable SVG
Courtesy of EMBL-EBI

Sequences (FASTA)