MPIC
Sequences for Capsella rubella were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.
| Database | Detected | Description | Start | End | E-Value |
|---|---|---|---|---|---|
| InterPro | IPR001567 | Peptidase M3A/M3B: | |||
| Pfam | PF01432 | Peptidase family M3 | 342 | 784 | 2.6E-135 |
| InterPro | IPR024077 | Neurolysin/Thimet oligopeptidase, domain 2: | |||
| Gene3D | G3DSA:1.10.1370.10 | 254 | 465 | 1.299999999E-142 | |
| Gene3D | G3DSA:1.10.1370.10 | 626 | 784 | 1.299999999E-142 | |
| InterPro | IPR024079 | Metallopeptidase, catalytic domain: | |||
| Gene3D | G3DSA:3.40.390.10 | 474 | 625 | 1.3E-53 | |
| InterPro | IPR024080 | Neurolysin/Thimet oligopeptidase, N-terminal: | |||
| Gene3D | G3DSA:1.20.1050.40 | 125 | 249 | 5.3E-19 | |
| InterPro | No IPR | Unintegrated signatures: | |||
| Coils | Coil | 258 | 279 | - | |
| PANTHER | PTHR11804 | 57 | 784 | 0.0 | |
| PANTHER | PTHR11804:SF39 | 57 | 784 | 0.0 | |
| Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 25 | 785 | - |
| Phobius | SIGNAL_PEPTIDE | Signal peptide region | 1 | 24 | - |
| Phobius | SIGNAL_PEPTIDE_C_REGION | C-terminal region of a signal peptide. | 20 | 24 | - |
| Phobius | SIGNAL_PEPTIDE_H_REGION | Hydrophobic region of a signal peptide. | 8 | 19 | - |
| Phobius | SIGNAL_PEPTIDE_N_REGION | N-terminal region of a signal peptide. | 1 | 7 | - |
| SUPERFAMILY | SSF55486 | 116 | 784 | 0.0 | |
| SignalP_EUK | SignalP-noTM | 1 | 24 | - | |
| SignalP_GRAM_NEGATIVE | SignalP-noTM | 1 | 23 | - | |
| SignalP_GRAM_POSITIVE | SignalP-TM | 1 | 23 | - | |
