ARC Centre of Excellence for Plant Energy Biology

MPIC — OM64 Transmembrane Helix Domain Predictions

Num_PredHel indicates the number of predicted transmembrane helix domains calculated by DAS and TMHMM predictors (for methods, see MPIC paper). A tally of both predictors is shown first.

Num_PredHel Frequency
1 47
2 5

1 predicted Species DAS_Num_PredHelTMHMM_Num_PredHel
AT5G09420 Species Arabidopsis thaliana Arabidopsis thaliana 1
Bra001692 Species Brassica rapa Brassica rapa 11
Bra009383 Species Brassica rapa Brassica rapa 1
Bra018737 Species Brassica rapa Brassica rapa 11
g11560.t1 Species Chlamydomonas reinhardtii Chlamydomonas reinhardtii 1
Carubv10000509m.g Species Capsella rubella Capsella rubella 1
Carubv10013209m.g Species Capsella rubella Capsella rubella 11
Cucsa.217970.1 Species Cucumis sativus Cucumis sativus 1
Eucgr.I02661.1 Species Eucalyptus grandis Eucalyptus grandis 11
Eucgr.K02274.1 Species Eucalyptus grandis Eucalyptus grandis 11
Esi_0082_0071 Species Ectocarpus siliculosus Ectocarpus siliculosus
Glyma05g24400.1 Species Glycine max Glycine max 22
Glyma05g33810.1 Species Glycine max Glycine max 1
Glyma08g05870.3 Species Glycine max Glycine max 11
Glyma08g19070.1 Species Glycine max Glycine max 21
Glyma15g05920.1 Species Glycine max Glycine max 11
Medtr8g107280.1 Species Medicago truncatula Medicago truncatula 11
LOC_Os02g51810.1 Species Oryza sativa Oryza sativa 11
LOC_Os03g50010.1 Species Oryza sativa Oryza sativa 21
Phpat.019G042800.1 Species Physcomitrella patens Physcomitrella patens 11
Phpat.021G056500.1 Species Physcomitrella patens Physcomitrella patens 11
Potri.001G205300.1 Species Populus trichocarpa Populus trichocarpa 11
Potri.012G046900.1 Species Populus trichocarpa Populus trichocarpa 11
Potri.015G038600.1 Species Populus trichocarpa Populus trichocarpa 11
29651.m000292|29651.t000012 Species Ricinus communis Ricinus communis 21
29806.m000976|29806.t000047 Species Ricinus communis Ricinus communis 11
PGSC0003DMG400005752|PGSC0003DMT400014757 Species Solanum tuberosum Solanum tuberosum 11
D8TMG3_VOLCA|tr Species Volvox carteri Volvox carteri
GSVIVG01008433001|GSVIVT01008433001 Species Vitis vinifera Vitis vinifera 11
GSVIVG01038788001|GSVIVT01038788001 Species Vitis vinifera Vitis vinifera 11
GRMZM2G159542_T01 Species Zea mays Zea mays 11

Sequences (FASTA)