MPIC
Sequences for Populus trichocarpa were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.
| Database | Detected | Description | Start | End | E-Value |
|---|---|---|---|---|---|
| InterPro | IPR000120 | Amidase: | |||
| PANTHER | PTHR11895 | 49 | 482 | 0.0 | |
| Pfam | PF01425 | Amidase | 53 | 441 | 5.7E-59 |
| InterPro | IPR011990 | Tetratricopeptide-like helical domain: | |||
| Gene3D | G3DSA:1.25.40.10 | 470 | 578 | 7.3E-36 | |
| InterPro | IPR013026 | Tetratricopeptide repeat-containing domain: | |||
| ProSiteProfiles | PS50293 | TPR repeat region circular profile. | 473 | 574 | 0.0 |
| InterPro | IPR013105 | Tetratricopeptide TPR2: | |||
| Pfam | PF07719 | Tetratricopeptide repeat | 542 | 574 | 1.4E-4 |
| InterPro | IPR019734 | Tetratricopeptide repeat: | |||
| ProSiteProfiles | PS50005 | TPR repeat profile. | 507 | 540 | 0.0 |
| ProSiteProfiles | PS50005 | TPR repeat profile. | 473 | 506 | 0.0 |
| ProSiteProfiles | PS50005 | TPR repeat profile. | 541 | 574 | 0.0 |
| SMART | SM00028 | Tetratricopeptide repeats | 541 | 574 | 2.000000752E-6 |
| SMART | SM00028 | Tetratricopeptide repeats | 473 | 506 | 6.599998525E-6 |
| SMART | SM00028 | Tetratricopeptide repeats | 507 | 540 | 8.200004068E-7 |
| InterPro | IPR023631 | Amidase signature domain: | |||
| Gene3D | G3DSA:3.90.1300.10 | 56 | 452 | 2.8E-82 | |
| SUPERFAMILY | SSF75304 | 52 | 446 | 0.0 | |
| InterPro | No IPR | Unintegrated signatures: | |||
| PANTHER | PTHR11895:SF39 | 49 | 482 | 0.0 | |
| Pfam | PF13414 | TPR repeat | 472 | 538 | 1.1E-17 |
| Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | 24 | 592 | - |
| Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 1 | 5 | - |
| Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 6 | 23 | - |
| SUPERFAMILY | SSF48452 | 470 | 579 | 0.0 | |
| TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 5 | 22 | - |
