MPIC
Sequences for Populus trichocarpa were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.
| Database | Detected | Description | Start | End | E-Value |
|---|---|---|---|---|---|
| InterPro | IPR000120 | Amidase: | |||
| PANTHER | PTHR11895 | 58 | 490 | 0.0 | |
| Pfam | PF01425 | Amidase | 63 | 450 | 1.5E-56 |
| InterPro | IPR011990 | Tetratricopeptide-like helical domain: | |||
| Gene3D | G3DSA:1.25.40.10 | 481 | 589 | 1.2E-33 | |
| InterPro | IPR013026 | Tetratricopeptide repeat-containing domain: | |||
| ProSiteProfiles | PS50293 | TPR repeat region circular profile. | 483 | 584 | 0.0 |
| InterPro | IPR019734 | Tetratricopeptide repeat: | |||
| ProSiteProfiles | PS50005 | TPR repeat profile. | 517 | 550 | 0.0 |
| ProSiteProfiles | PS50005 | TPR repeat profile. | 483 | 516 | 0.0 |
| ProSiteProfiles | PS50005 | TPR repeat profile. | 551 | 584 | 0.0 |
| SMART | SM00028 | Tetratricopeptide repeats | 551 | 584 | 0.003299999833 |
| SMART | SM00028 | Tetratricopeptide repeats | 517 | 550 | 6.499993779E-9 |
| SMART | SM00028 | Tetratricopeptide repeats | 483 | 516 | 3.999998617E-7 |
| InterPro | IPR023631 | Amidase signature domain: | |||
| Gene3D | G3DSA:3.90.1300.10 | 54 | 453 | 3.0E-77 | |
| SUPERFAMILY | SSF75304 | 31 | 453 | 0.0 | |
| InterPro | No IPR | Unintegrated signatures: | |||
| PANTHER | PTHR11895:SF6 | 58 | 490 | 0.0 | |
| Pfam | PF13414 | TPR repeat | 483 | 548 | 1.6E-18 |
| Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 30 | 599 | - |
| Phobius | SIGNAL_PEPTIDE | Signal peptide region | 1 | 29 | - |
| Phobius | SIGNAL_PEPTIDE_C_REGION | C-terminal region of a signal peptide. | 25 | 29 | - |
| Phobius | SIGNAL_PEPTIDE_H_REGION | Hydrophobic region of a signal peptide. | 13 | 24 | - |
| Phobius | SIGNAL_PEPTIDE_N_REGION | N-terminal region of a signal peptide. | 1 | 12 | - |
| SUPERFAMILY | SSF48452 | 477 | 592 | 0.0 | |
| TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 13 | 30 | - |
