MPIC
Sequences for Physcomitrella patens were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.
| Database | Detected | Description | Start | End | E-Value |
|---|---|---|---|---|---|
| InterPro | IPR000120 | Amidase: | |||
| PANTHER | PTHR11895 | 52 | 484 | 0.0 | |
| Pfam | PF01425 | Amidase | 60 | 443 | 1.2E-65 |
| InterPro | IPR011990 | Tetratricopeptide-like helical domain: | |||
| Gene3D | G3DSA:1.25.40.10 | 471 | 588 | 3.5E-34 | |
| InterPro | IPR013026 | Tetratricopeptide repeat-containing domain: | |||
| ProSiteProfiles | PS50293 | TPR repeat region circular profile. | 475 | 576 | 0.0 |
| InterPro | IPR013105 | Tetratricopeptide TPR2: | |||
| Pfam | PF07719 | Tetratricopeptide repeat | 544 | 576 | 0.0024 |
| InterPro | IPR019734 | Tetratricopeptide repeat: | |||
| ProSiteProfiles | PS50005 | TPR repeat profile. | 543 | 576 | 0.0 |
| ProSiteProfiles | PS50005 | TPR repeat profile. | 509 | 542 | 0.0 |
| ProSiteProfiles | PS50005 | TPR repeat profile. | 475 | 508 | 0.0 |
| SMART | SM00028 | Tetratricopeptide repeats | 543 | 576 | 1.499999776E-4 |
| SMART | SM00028 | Tetratricopeptide repeats | 509 | 542 | 3.399999724E-7 |
| SMART | SM00028 | Tetratricopeptide repeats | 475 | 508 | 7.499996059E-6 |
| InterPro | IPR020556 | Amidase, conserved site: | |||
| ProSitePatterns | PS00571 | Amidases signature. | 145 | 176 | - |
| InterPro | IPR023631 | Amidase signature domain: | |||
| Gene3D | G3DSA:3.90.1300.10 | 58 | 450 | 5.2E-88 | |
| SUPERFAMILY | SSF75304 | 59 | 449 | 0.0 | |
| InterPro | No IPR | Unintegrated signatures: | |||
| PANTHER | PTHR11895:SF6 | 52 | 484 | 0.0 | |
| Pfam | PF13414 | TPR repeat | 475 | 540 | 2.9E-18 |
| Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | 26 | 592 | - |
| Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 1 | 5 | - |
| Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 6 | 25 | - |
| SUPERFAMILY | SSF48452 | 474 | 588 | 0.0 | |
| TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 7 | 25 | - |
