MPIC
Sequences for Physcomitrella patens were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.
| Database | Detected | Description | Start | End | E-Value |
|---|---|---|---|---|---|
| InterPro | IPR000120 | Amidase: | |||
| PANTHER | PTHR11895 | 53 | 491 | 1.2E-228 | |
| Pfam | PF01425 | Amidase | 53 | 450 | 5.8E-65 |
| InterPro | IPR011990 | Tetratricopeptide-like helical domain: | |||
| Gene3D | G3DSA:1.25.40.10 | 480 | 595 | 9.7E-33 | |
| InterPro | IPR013026 | Tetratricopeptide repeat-containing domain: | |||
| ProSiteProfiles | PS50293 | TPR repeat region circular profile. | 482 | 583 | 23.779 |
| InterPro | IPR013105 | Tetratricopeptide TPR2: | |||
| Pfam | PF07719 | Tetratricopeptide repeat | 551 | 583 | 0.0017 |
| InterPro | IPR019734 | Tetratricopeptide repeat: | |||
| ProSiteProfiles | PS50005 | TPR repeat profile. | 550 | 583 | 10.886 |
| ProSiteProfiles | PS50005 | TPR repeat profile. | 482 | 515 | 8.555 |
| ProSiteProfiles | PS50005 | TPR repeat profile. | 516 | 549 | 7.641 |
| SMART | SM00028 | Tetratricopeptide repeats | 482 | 515 | 0.0069 |
| SMART | SM00028 | Tetratricopeptide repeats | 550 | 583 | 0.0064 |
| SMART | SM00028 | Tetratricopeptide repeats | 516 | 549 | 2.1E-5 |
| InterPro | IPR020556 | Amidase, conserved site: | |||
| ProSitePatterns | PS00571 | Amidases signature. | 143 | 174 | - |
| InterPro | IPR023631 | Amidase signature domain: | |||
| Gene3D | G3DSA:3.90.1300.10 | 49 | 458 | 5.6E-84 | |
| SUPERFAMILY | SSF75304 | 28 | 456 | 6.93E-84 | |
| InterPro | No IPR | Unintegrated signatures: | |||
| PANTHER | PTHR11895:SF6 | 53 | 491 | 1.2E-228 | |
| Pfam | PF13414 | TPR repeat | 481 | 546 | 4.3E-19 |
| Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | 1 | 6 | - |
| Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 27 | 599 | - |
| Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 7 | 26 | - |
| SUPERFAMILY | SSF48452 | 480 | 596 | 1.08E-30 | |
| TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 7 | 26 | - |
