MPIC
Sequences for Oryza sativa were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.
| Database | Detected | Description | Start | End | E-Value |
|---|---|---|---|---|---|
| InterPro | IPR000120 | Amidase: | |||
| PANTHER | PTHR11895 | 70 | 503 | 0.0 | |
| Pfam | PF01425 | Amidase | 75 | 462 | 6.0E-51 |
| InterPro | IPR001440 | Tetratricopeptide TPR1: | |||
| Pfam | PF00515 | Tetratricopeptide repeat | 565 | 598 | 0.0045 |
| InterPro | IPR011990 | Tetratricopeptide-like helical domain: | |||
| Gene3D | G3DSA:1.25.40.10 | 496 | 603 | 3.3E-33 | |
| InterPro | IPR013026 | Tetratricopeptide repeat-containing domain: | |||
| ProSiteProfiles | PS50293 | TPR repeat region circular profile. | 497 | 598 | 0.0 |
| InterPro | IPR019734 | Tetratricopeptide repeat: | |||
| ProSiteProfiles | PS50005 | TPR repeat profile. | 497 | 530 | 0.0 |
| ProSiteProfiles | PS50005 | TPR repeat profile. | 565 | 598 | 0.0 |
| ProSiteProfiles | PS50005 | TPR repeat profile. | 531 | 564 | 0.0 |
| SMART | SM00028 | Tetratricopeptide repeats | 531 | 564 | 5.799996539E-9 |
| SMART | SM00028 | Tetratricopeptide repeats | 565 | 598 | 4.199997713E-5 |
| SMART | SM00028 | Tetratricopeptide repeats | 497 | 530 | 8.299995812E-6 |
| InterPro | IPR023631 | Amidase signature domain: | |||
| Gene3D | G3DSA:3.90.1300.10 | 66 | 463 | 7.0E-71 | |
| SUPERFAMILY | SSF75304 | 41 | 465 | 0.0 | |
| InterPro | No IPR | Unintegrated signatures: | |||
| PANTHER | PTHR11895:SF6 | 70 | 503 | 0.0 | |
| Pfam | PF13414 | TPR repeat | 497 | 561 | 3.0E-18 |
| Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | 39 | 613 | - |
| Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 1 | 19 | - |
| Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 20 | 38 | - |
| SUPERFAMILY | SSF48452 | 497 | 600 | 0.0 | |
| TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 20 | 38 | - |
