ARC Centre of Excellence for Plant Energy Biology

MPIC — OM64 – Glyma08g05870.3 InterPro Results

Sequences for Glycine max were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.

Database Detected Description Start End E-Value
InterPro IPR000120 Amidase:
PANTHER PTHR11895 50 483 0.0
Pfam PF01425 Amidase 54 442 2.8E-52
InterPro IPR011990 Tetratricopeptide-like helical domain:
Gene3D G3DSA:1.25.40.10 472 581 4.5E-37
InterPro IPR013026 Tetratricopeptide repeat-containing domain:
ProSiteProfiles PS50293 TPR repeat region circular profile. 475 576 0.0
InterPro IPR013105 Tetratricopeptide TPR2:
Pfam PF07719 Tetratricopeptide repeat 544 576 5.8E-6
InterPro IPR019734 Tetratricopeptide repeat:
ProSiteProfiles PS50005 TPR repeat profile. 543 576 0.0
ProSiteProfiles PS50005 TPR repeat profile. 509 542 0.0
ProSiteProfiles PS50005 TPR repeat profile. 475 508 0.0
SMART SM00028 Tetratricopeptide repeats 543 576 2.19999901E-7
SMART SM00028 Tetratricopeptide repeats 509 542 1.799999517E-8
SMART SM00028 Tetratricopeptide repeats 475 508 1.399999689E-4
InterPro IPR023631 Amidase signature domain:
Gene3D G3DSA:3.90.1300.10 31 448 6.8E-77
SUPERFAMILY SSF75304 24 446 0.0
InterPro No IPR Unintegrated signatures:
PANTHER PTHR11895:SF39 50 483 0.0
Pfam PF13414 TPR repeat 474 540 2.6E-20
Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. 25 591 -
Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. 1 5 -
Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane. 6 24 -
SUPERFAMILY SSF48452 473 580 0.0
TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane. 7 24 -

InterPro
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Courtesy of EMBL-EBI

Sequences (FASTA)