ARC Centre of Excellence for Plant Energy Biology

MPIC — OM64 – Glyma05g33810.1 InterPro Results

Sequences for Glycine max were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.

Database Detected Description Start End E-Value
InterPro IPR000120 Amidase:
PANTHER PTHR11895 46 479 0.0
Pfam PF01425 Amidase 313 438 9.2E-10
Pfam PF01425 Amidase 48 205 6.4E-42
InterPro IPR011990 Tetratricopeptide-like helical domain:
Gene3D G3DSA:1.25.40.10 468 577 5.8E-37
InterPro IPR013026 Tetratricopeptide repeat-containing domain:
ProSiteProfiles PS50293 TPR repeat region circular profile. 471 572 0.0
InterPro IPR013105 Tetratricopeptide TPR2:
Pfam PF07719 Tetratricopeptide repeat 540 572 7.4E-6
InterPro IPR019734 Tetratricopeptide repeat:
ProSiteProfiles PS50005 TPR repeat profile. 539 572 0.0
ProSiteProfiles PS50005 TPR repeat profile. 505 538 0.0
ProSiteProfiles PS50005 TPR repeat profile. 471 504 0.0
SMART SM00028 Tetratricopeptide repeats 539 572 3.600000387E-7
SMART SM00028 Tetratricopeptide repeats 471 504 1.399999689E-4
SMART SM00028 Tetratricopeptide repeats 505 538 5.800002907E-8
InterPro IPR023631 Amidase signature domain:
Gene3D G3DSA:3.90.1300.10 42 444 1.9E-75
SUPERFAMILY SSF75304 20 442 0.0
InterPro No IPR Unintegrated signatures:
PANTHER PTHR11895:SF39 46 479 0.0
Pfam PF13414 TPR repeat 470 536 1.6E-19
Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. 22 587 -
Phobius SIGNAL_PEPTIDE Signal peptide region 1 21 -
Phobius SIGNAL_PEPTIDE_C_REGION C-terminal region of a signal peptide. 17 21 -
Phobius SIGNAL_PEPTIDE_H_REGION Hydrophobic region of a signal peptide. 5 16 -
Phobius SIGNAL_PEPTIDE_N_REGION N-terminal region of a signal peptide. 1 4 -
SUPERFAMILY SSF48452 469 576 0.0

InterPro
Clickable SVG
Courtesy of EMBL-EBI

Sequences (FASTA)