ARC Centre of Excellence for Plant Energy Biology

MPIC — OM64 – GRMZM2G159542_T01 InterPro Results

Sequences for Zea mays were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.

Database Detected Description Start End E-Value
InterPro IPR000120 Amidase:
PANTHER PTHR11895 72 504 0.0
Pfam PF01425 Amidase 326 463 6.6E-5
Pfam PF01425 Amidase 77 231 1.7E-45
InterPro IPR001440 Tetratricopeptide TPR1:
Pfam PF00515 Tetratricopeptide repeat 566 599 3.1E-4
InterPro IPR011990 Tetratricopeptide-like helical domain:
Gene3D G3DSA:1.25.40.10 492 605 5.6E-35
InterPro IPR013026 Tetratricopeptide repeat-containing domain:
ProSiteProfiles PS50293 TPR repeat region circular profile. 498 599 0.0
InterPro IPR019734 Tetratricopeptide repeat:
ProSiteProfiles PS50005 TPR repeat profile. 498 531 0.0
ProSiteProfiles PS50005 TPR repeat profile. 566 599 0.0
ProSiteProfiles PS50005 TPR repeat profile. 532 565 0.0
SMART SM00028 Tetratricopeptide repeats 498 531 1.900000685E-5
SMART SM00028 Tetratricopeptide repeats 532 565 2.599999467E-9
SMART SM00028 Tetratricopeptide repeats 566 599 2.699998871E-6
InterPro IPR023631 Amidase signature domain:
Gene3D G3DSA:3.90.1300.10 75 464 4.6E-70
SUPERFAMILY SSF75304 59 464 0.0
InterPro No IPR Unintegrated signatures:
PANTHER PTHR11895:SF6 72 504 0.0
Pfam PF13414 TPR repeat 498 562 3.3E-18
Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. 41 614 -
Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. 1 21 -
Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane. 22 40 -
SUPERFAMILY SSF48452 492 612 0.0
TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane. 21 40 -

InterPro
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Courtesy of EMBL-EBI

Sequences (FASTA)