MPIC
Sequences for Brassica rapa were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.
| Database | Detected | Description | Start | End | E-Value |
|---|---|---|---|---|---|
| InterPro | IPR000073 | Alpha/beta hydrolase fold-1: | |||
| PRINTS | PR00111 | Alpha/beta hydrolase fold signature | 743 | 756 | 5.599999894E-14 |
| PRINTS | PR00111 | Alpha/beta hydrolase fold signature | 699 | 714 | 5.599999894E-14 |
| PRINTS | PR00111 | Alpha/beta hydrolase fold signature | 864 | 878 | 5.599999894E-14 |
| PRINTS | PR00111 | Alpha/beta hydrolase fold signature | 757 | 770 | 5.599999894E-14 |
| InterPro | IPR000120 | Amidase: | |||
| PANTHER | PTHR11895 | 61 | 497 | 0.0 | |
| Pfam | PF01425 | Amidase | 67 | 455 | 5.3E-59 |
| InterPro | IPR011990 | Tetratricopeptide-like helical domain: | |||
| Gene3D | G3DSA:1.25.40.10 | 487 | 604 | 3.2E-35 | |
| InterPro | IPR013026 | Tetratricopeptide repeat-containing domain: | |||
| ProSiteProfiles | PS50293 | TPR repeat region circular profile. | 487 | 588 | 0.0 |
| InterPro | IPR019734 | Tetratricopeptide repeat: | |||
| ProSiteProfiles | PS50005 | TPR repeat profile. | 521 | 554 | 0.0 |
| ProSiteProfiles | PS50005 | TPR repeat profile. | 487 | 520 | 0.0 |
| ProSiteProfiles | PS50005 | TPR repeat profile. | 555 | 588 | 0.0 |
| SMART | SM00028 | Tetratricopeptide repeats | 487 | 520 | 1.499999776E-5 |
| SMART | SM00028 | Tetratricopeptide repeats | 521 | 554 | 6.400000388E-9 |
| SMART | SM00028 | Tetratricopeptide repeats | 555 | 588 | 3.600000387E-4 |
| InterPro | IPR023631 | Amidase signature domain: | |||
| Gene3D | G3DSA:3.90.1300.10 | 46 | 458 | 6.599999999E-73 | |
| SUPERFAMILY | SSF75304 | 41 | 456 | 0.0 | |
| InterPro | IPR029058 | Alpha/Beta hydrolase fold: | |||
| Gene3D | G3DSA:3.40.50.1820 | 660 | 919 | 5.5E-48 | |
| SUPERFAMILY | SSF53474 | 661 | 919 | 0.0 | |
| InterPro | No IPR | Unintegrated signatures: | |||
| Coils | Coil | 591 | 612 | - | |
| PANTHER | PTHR11895:SF6 | 61 | 497 | 0.0 | |
| Pfam | PF12697 | Alpha/beta hydrolase family | 675 | 912 | 3.1E-30 |
| Pfam | PF13414 | TPR repeat | 486 | 551 | 8.4E-17 |
| Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | 35 | 923 | - |
| Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 1 | 16 | - |
| Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 17 | 34 | - |
| SUPERFAMILY | SSF48452 | 488 | 605 | 0.0 | |
