ARC Centre of Excellence for Plant Energy Biology

MPIC — OM64 – AT5G09420 InterPro Results

Sequences for all species were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.

Database Description Start End E-Value Detected
InterPro Amidase: IPR000120
PANTHER 65 498 6.1E-213 PTHR11895
Pfam Amidase 66 455 1.5E-56 PF01425
InterPro Tetratricopeptide TPR1: IPR001440
Pfam Tetratricopeptide repeat 556 589 8.1E-4 PF00515
InterPro Tetratricopeptide-like helical: IPR011990
Gene3D 486 593 1.7E-31 G3DSA:1.25.40.10
InterPro Tetratricopeptide repeat-containing domain: IPR013026
ProSiteProfiles TPR repeat region circular profile. 488 589 20.04 PS50293
InterPro Tetratricopeptide repeat: IPR019734
ProSiteProfiles TPR repeat profile. 488 521 8.26 PS50005
ProSiteProfiles TPR repeat profile. 556 589 10.03 PS50005
ProSiteProfiles TPR repeat profile. 522 555 5.428 PS50005
SMART Tetratricopeptide repeats 488 521 0.0031 SM00028
SMART Tetratricopeptide repeats 522 555 8.0E-4 SM00028
SMART Tetratricopeptide repeats 556 589 0.0012 SM00028
InterPro Amidase signature domain: IPR023631
Gene3D 50 458 1.0E-73 G3DSA:3.90.1300.10
SUPERFAMILY 37 457 3.79E-74 SSF75304
InterPro Unintegrated signatures: No IPR
Coils 362 383 - Coil
PANTHER 65 498 6.1E-213 PTHR11895:SF6
Pfam TPR repeat 488 552 8.9E-15 PF13414
Phobius Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. 35 603 - CYTOPLASMIC_DOMAIN
Phobius Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. 1 16 - NON_CYTOPLASMIC_DOMAIN
Phobius Region of a membrane-bound protein predicted to be embedded in the membrane. 17 34 - TRANSMEMBRANE
SUPERFAMILY 488 594 2.57E-27 SSF48452

InterPro
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Courtesy of EMBL-EBI

Sequences (FASTA)