ARC Centre of Excellence for Plant Energy Biology

MPIC — MPP-ALPHA1,MPP-ALPHA2,MPP-BETA,MAS1,MAS2 Transmembrane Helix Domain Predictions

Num_PredHel indicates the number of predicted transmembrane helix domains calculated by DAS and TMHMM predictors (for methods, see MPIC paper). A tally of both predictors is shown first.

Num_PredHel Frequency
1 6

1 predicted Species DAS_Num_PredHelTMHMM_Num_PredHel
AT1G51980 Species Arabidopsis thaliana Arabidopsis thaliana
AT3G02090 Species Arabidopsis thaliana Arabidopsis thaliana
AT3G16480 Species Arabidopsis thaliana Arabidopsis thaliana
Bra014305 Species Brassica rapa Brassica rapa
Bra018939 Species Brassica rapa Brassica rapa
Bra021477 Species Brassica rapa Brassica rapa
Bra022162 Species Brassica rapa Brassica rapa
Bra030405 Species Brassica rapa Brassica rapa
Bra039151 Species Brassica rapa Brassica rapa
gi|17553678|NP_498202.1|ref Species Caenorhabditis elegans Caenorhabditis elegans
gi|453222763|MPP alpha|NP_490888.2|ref Species Caenorhabditis elegans Caenorhabditis elegans
gi|71999683|MPP B|NP_501576.2|ref Species Caenorhabditis elegans Caenorhabditis elegans
CMK260CT Species Cyanidioschyzon merolae Cyanidioschyzon merolae
CMM104CT Species Cyanidioschyzon merolae Cyanidioschyzon merolae
CMQ089CT Species Cyanidioschyzon merolae Cyanidioschyzon merolae
Cre12.g509750.t1.2 Species Chlamydomonas reinhardtii Chlamydomonas reinhardtii
Cre12.g523850.t1.2 Species Chlamydomonas reinhardtii Chlamydomonas reinhardtii
Cre17.g722800.t1.2 Species Chlamydomonas reinhardtii Chlamydomonas reinhardtii
Carubv10000696m.g Species Capsella rubella Capsella rubella
Carubv10008921m.g Species Capsella rubella Capsella rubella
Carubv10013366m.g Species Capsella rubella Capsella rubella
Carubv10015621m.g Species Capsella rubella Capsella rubella
Cucsa.021700.1 Species Cucumis sativus Cucumis sativus
Cucsa.081570.1 Species Cucumis sativus Cucumis sativus
Cucsa.116810.1 Species Cucumis sativus Cucumis sativus
gi|111226358|mitochondrial processing peptidase beta subunit|ref|XP_001134518.1 Species Dictyostelium discoideum Dictyostelium discoideum
gi|111226878|MPP alpha|ref|XP_001134603.1 Species Dictyostelium discoideum Dictyostelium discoideum
gi|66803202|ref|XP_635444.1 Species Dictyostelium discoideum Dictyostelium discoideum
Eucgr.C03704.1 Species Eucalyptus grandis Eucalyptus grandis
Eucgr.F03085.1 Species Eucalyptus grandis Eucalyptus grandis
Eucgr.H00078.1 Species Eucalyptus grandis Eucalyptus grandis
Esi0011_0084|MPP beta Species Ectocarpus siliculosus Ectocarpus siliculosus
Esi0098_0070|MPP beta Species Ectocarpus siliculosus Ectocarpus siliculosus
Esi0111_0016|MPP alpha Species Ectocarpus siliculosus Ectocarpus siliculosus
Esi0268_0010|MPP alpha Species Ectocarpus siliculosus Ectocarpus siliculosus
Glyma05g36040.1 Species Glycine max Glycine max
Glyma07g01720.1 Species Glycine max Glycine max
Glyma08g03580.1 Species Glycine max Glycine max
Glyma08g21380.1 Species Glycine max Glycine max
Glyma08g46020.1 Species Glycine max Glycine max
Glyma13g43000.1 Species Glycine max Glycine max
Glyma14g13370.1 Species Glycine max Glycine max
Glyma15g02390.1 Species Glycine max Glycine max
Glyma16g10360.1 Species Glycine max Glycine max
Glyma18g31550.3 Species Glycine max Glycine max
gi|24308013|NP_055975|ref Species Homo sapiens Homo sapiens
cytochrome b-c1 complex subunit 1|gi|46593007|NP_003356.2|ref Species Homo sapiens Homo sapiens
cytochrome b-c1 complex subunit 2,Hs|gi|50592988|NP_003357.2|ref Species Homo sapiens Homo sapiens
gi|94538354|MPP beta|NP_004270.2|ref Species Homo sapiens Homo sapiens
Medtr8g014660.1 Species Medicago truncatula Medicago truncatula
Medtr8g102230.1 Species Medicago truncatula Medicago truncatula
gi|85109350|MPP alpha|ref|XP_962874.1 Species Neurospora crassa Neurospora crassa
gi|85119638|MPP beta|ref|XP_965680.1 Species Neurospora crassa Neurospora crassa
LOC_Os01g09560.1 Species Oryza sativa Oryza sativa
LOC_Os01g51390.1 Species Oryza sativa Oryza sativa
LOC_Os01g53700.1 Species Oryza sativa Oryza sativa
LOC_Os01g73550.1 Species Oryza sativa Oryza sativa
LOC_Os03g11410.1 Species Oryza sativa Oryza sativa
LOC_Os05g44916.1 Species Oryza sativa Oryza sativa
Phpat.003G045700.1 Species Physcomitrella patens Physcomitrella patens
Phpat.004G049300.1 Species Physcomitrella patens Physcomitrella patens
Phpat.011G047500.1 Species Physcomitrella patens Physcomitrella patens
Phpat.013G074200.1 Species Physcomitrella patens Physcomitrella patens
Phpat.016G072700.1 Species Physcomitrella patens Physcomitrella patens
Potri.001G191100.1 Species Populus trichocarpa Populus trichocarpa
Potri.004G118900.1 Species Populus trichocarpa Populus trichocarpa
Potri.008G193200.1 Species Populus trichocarpa Populus trichocarpa
Potri.010G036700.1 Species Populus trichocarpa Populus trichocarpa
Potri.017G092400.1 Species Populus trichocarpa Populus trichocarpa
28753.m000078|28753.t000003 Species Ricinus communis Ricinus communis
29630.m000808|29630.t000033 Species Ricinus communis Ricinus communis
29912.m005353|29912.t000079 Species Ricinus communis Ricinus communis
30146.m003490|30146.t000067 Species Ricinus communis Ricinus communis
34269.m000014|34269.t000001 Species Ricinus communis Ricinus communis
146300 Species Selaginella moellendorffii Selaginella moellendorffii
183257 Species Selaginella moellendorffii Selaginella moellendorffii
420946 Species Selaginella moellendorffii Selaginella moellendorffii
440930 Species Selaginella moellendorffii Selaginella moellendorffii 1
448827 Species Selaginella moellendorffii Selaginella moellendorffii
PGSC0003DMG400000289|PGSC0003DMT400000784 Species Solanum tuberosum Solanum tuberosum
PGSC0003DMG400001355|PGSC0003DMT400003437 Species Solanum tuberosum Solanum tuberosum
PGSC0003DMG400028380|PGSC0003DMT400072957 Species Solanum tuberosum Solanum tuberosum
Vocar20001024m.g Species Volvox carteri Volvox carteri
Vocar20001314m.g Species Volvox carteri Volvox carteri
Vocar20014031m.g Species Volvox carteri Volvox carteri
GSVIVG01011510001|GSVIVT01011510001 Species Vitis vinifera Vitis vinifera
GSVIVG01012193001|GSVIVT01012193001 Species Vitis vinifera Vitis vinifera
GSVIVG01015273001|GSVIVT01015273001 Species Vitis vinifera Vitis vinifera
GSVIVG01016955001|GSVIVT01016955001 Species Vitis vinifera Vitis vinifera
GSVIVG01021441001|GSVIVT01021441001 Species Vitis vinifera Vitis vinifera
GRMZM2G005036_T01 Species Zea mays Zea mays
GRMZM2G007715_T01 Species Zea mays Zea mays
GRMZM2G068336_T01 Species Zea mays Zea mays 1
GRMZM2G083984_T01 Species Zea mays Zea mays
GRMZM2G091563_T01 Species Zea mays Zea mays
GRMZM2G100511_T01 Species Zea mays Zea mays
GRMZM2G103725_T01 Species Zea mays Zea mays 1
GRMZM2G118074_T01 Species Zea mays Zea mays 1
GRMZM2G166646_T01 Species Zea mays Zea mays
GRMZM2G167767_T01 Species Zea mays Zea mays
GRMZM2G174137_T01 Species Zea mays Zea mays
GRMZM2G324991_T03 Species Zea mays Zea mays 11
GRMZM5G827505_T01 Species Zea mays Zea mays

Sequences (FASTA)