ARC Centre of Excellence for Plant Energy Biology

MPIC — MIO10 Transmembrane Helix Domain Predictions

Num_PredHel indicates the number of predicted transmembrane helix domains calculated by DAS and TMHMM predictors (for methods, see MPIC paper). A tally of both predictors is shown first.

Num_PredHel Frequency
1 27
2 4

1 predicted Species DAS_Num_PredHelTMHMM_Num_PredHel
AT1G22520 Species Arabidopsis thaliana Arabidopsis thaliana 2
AT1G72170 Species Arabidopsis thaliana Arabidopsis thaliana 1
Bra003890 Species Brassica rapa Brassica rapa 1
Bra012332 Species Brassica rapa Brassica rapa 1
Bra016083 Species Brassica rapa Brassica rapa 1
Bra016376 Species Brassica rapa Brassica rapa
gi|17534317 Species Caenorhabditis elegans Caenorhabditis elegans 1
M1V5W2_CYAME|tr Species Cyanidioschyzon merolae Cyanidioschyzon merolae 11
Cre12.g515150.t1.2 Species Chlamydomonas reinhardtii Chlamydomonas reinhardtii 1
Carubv10010740 Species Capsella rubella Capsella rubella 11
D7FW43_ECTSI|tr Species Ectocarpus siliculosus Ectocarpus siliculosus 12
Glyma04g43561 Species Glycine max Glycine max
Glyma06g48350.1 Species Glycine max Glycine max
gi|323276670 Species Homo sapiens Homo sapiens 11
Medtr3g005050.1 Species Medicago truncatula Medicago truncatula 1
gi|85083518 Species Neurospora crassa Neurospora crassa 11
Os03g0840900 Species Oryza sativa Oryza sativa 2
Pp1s15_130V6.1 Species Physcomitrella patens Physcomitrella patens
Potri.013G105700 Species Populus trichocarpa Populus trichocarpa
Potri.019G079100.1 Species Populus trichocarpa Populus trichocarpa 1
B9S728_RICCO|tr Species Ricinus communis Ricinus communis
YCL057C-A Species Saccharomyces cerevisiae Saccharomyces cerevisiae 11
59864 Species Selaginella moellendorffii Selaginella moellendorffii 11
69829 Species Selaginella moellendorffii Selaginella moellendorffii 1
PGSC0003DMT400065885 Species Solanum tuberosum Solanum tuberosum 1
GSVIVT01015950001 Species Vitis vinifera Vitis vinifera 11
GSVIVT01026083001 Species Vitis vinifera Vitis vinifera 2
GRMZM2G025227_T01 Species Zea mays Zea mays 1
GRMZM2G704150_T03 Species Zea mays Zea mays 1

Sequences (FASTA)