ARC Centre of Excellence for Plant Energy Biology

MPIC — MIO10 Athena Promoter Motif Predictions

Putative and known regulatory elements within upstream regions of each gene were obtained from, and enable analysis of co-regulated genes sourced from, Athena: Arabidopsis thaliana a resource for rapid visualization and systematic analysis of Arabidopsis promoter sequences (O’Connor et al. 2005).

Locus Species Motif Pattern Start End Sense Sequence
At1g22520 Species Arabidopsis thaliana Arabidopsis thaliana ABRE-like binding site motifBACGTGKM-449-442-TACACGTA
At1g22520 Species Arabidopsis thaliana Arabidopsis thaliana AtMYC2 BS in RD22CACATG-141-136+CACATG
At1g22520 Species Arabidopsis thaliana Arabidopsis thaliana AtMYC2 BS in RD22CACATG-226-221+CACATG
At1g22520 Species Arabidopsis thaliana Arabidopsis thaliana AtMYC2 BS in RD22CACATG-86-81+CACATG
At1g22520 Species Arabidopsis thaliana Arabidopsis thaliana BoxII promoter motifGGTTAA-732-727+GGTTAA
At1g22520 Species Arabidopsis thaliana Arabidopsis thaliana Ibox promoter motifGATAAG-433-428-CTTATC
At1g22520 Species Arabidopsis thaliana Arabidopsis thaliana JASE1 motif in OPR1CGTCAATGAA-858-849-TTCATTGACG
At1g22520 Species Arabidopsis thaliana Arabidopsis thaliana MYB1LEPRGTTAGTT-972-966-AACTAAC
At1g22520 Species Arabidopsis thaliana Arabidopsis thaliana MYB3 binding site motifTAACTAAC-973-966+TAACTAAC
At1g22520 Species Arabidopsis thaliana Arabidopsis thaliana MYB4 binding site motifAMCWAMC-114-108+AACAAAC
At1g22520 Species Arabidopsis thaliana Arabidopsis thaliana MYB4 binding site motifAMCWAMC-972-966+AACTAAC
At1g22520 Species Arabidopsis thaliana Arabidopsis thaliana MYCATERD1CATGTG-141-136-CACATG
At1g22520 Species Arabidopsis thaliana Arabidopsis thaliana MYCATERD1CATGTG-226-221-CACATG
At1g22520 Species Arabidopsis thaliana Arabidopsis thaliana MYCATERD1CATGTG-86-81-CACATG
At1g22520 Species Arabidopsis thaliana Arabidopsis thaliana RY-repeat promoter motifCATGCATG-134-127+CATGCATG
At1g22520 Species Arabidopsis thaliana Arabidopsis thaliana RY-repeat promoter motifCATGCATG-134-127-CATGCATG
At1g22520 Species Arabidopsis thaliana Arabidopsis thaliana TATA-box MotifTATAAA-910-905-TTTATA
At1g72170 Species Arabidopsis thaliana Arabidopsis thaliana ABRE-like binding site motifBACGTGKM-362-355-TCCACGTG
At1g72170 Species Arabidopsis thaliana Arabidopsis thaliana ACGTABREMOTIFA2OSEMACGTGKC-51-45-GCCACGT
At1g72170 Species Arabidopsis thaliana Arabidopsis thaliana ARF binding site motifTGTCTC-245-240+TGTCTC
At1g72170 Species Arabidopsis thaliana Arabidopsis thaliana ARF binding site motifTGTCTC-636-631-GAGACA
At1g72170 Species Arabidopsis thaliana Arabidopsis thaliana CACGTGMOTIFCACGTG-360-355+CACGTG
At1g72170 Species Arabidopsis thaliana Arabidopsis thaliana CACGTGMOTIFCACGTG-360-355-CACGTG
At1g72170 Species Arabidopsis thaliana Arabidopsis thaliana LEAFYATAGCCAATGT-97-91+CCAATGT
At1g72170 Species Arabidopsis thaliana Arabidopsis thaliana MYB binding site promoterMACCWAMC-158-151+AACCAAAC
At1g72170 Species Arabidopsis thaliana Arabidopsis thaliana MYB1 binding site motifMTCCWACC-274-267+ATCCAACC
At1g72170 Species Arabidopsis thaliana Arabidopsis thaliana MYB1ATWAACCA-159-154+AAACCA
At1g72170 Species Arabidopsis thaliana Arabidopsis thaliana MYB1ATWAACCA-211-206-TGGTTA
At1g72170 Species Arabidopsis thaliana Arabidopsis thaliana MYB2ATTAACTG-240-235-CAGTTA
At1g72170 Species Arabidopsis thaliana Arabidopsis thaliana MYB4 binding site motifAMCWAMC-157-151+ACCAAAC
At1g72170 Species Arabidopsis thaliana Arabidopsis thaliana TATA-box MotifTATAAA-661-656-TTTATA
At1g72170 Species Arabidopsis thaliana Arabidopsis thaliana W-box promoter motifTTGACY-18-13-AGTCAA

Sequences (FASTA)