ARC Centre of Excellence for Plant Energy Biology

MPIC — MGR2 Transmembrane Helix Domain Predictions

Num_PredHel indicates the number of predicted transmembrane helix domains calculated by DAS and TMHMM predictors (for methods, see MPIC paper). A tally of both predictors is shown first.

Num_PredHel Frequency
1 13
2 45

2 predicted Species DAS_Num_PredHelTMHMM_Num_PredHel
AT3G07910.1 Species Arabidopsis thaliana Arabidopsis thaliana 22
Bra001276 Species Brassica rapa Brassica rapa 12
Bra029687 Species Brassica rapa Brassica rapa 22
Bra040039 Species Brassica rapa Brassica rapa 12
gi|71986658 Species Caenorhabditis elegans Caenorhabditis elegans 11
M1VG27_CYAME|tr Species Cyanidioschyzon merolae Cyanidioschyzon merolae 22
Cre01.g010500.t1.2 Species Chlamydomonas reinhardtii Chlamydomonas reinhardtii 12
Carubv10015032m.g|Cru Species Capsella rubella Capsella rubella 22
Q54M86|ROMO1_DICDI|sp Species Dictyostelium discoideum Dictyostelium discoideum 12
Eucgr.J01186.1 Species Eucalyptus grandis Eucalyptus grandis 22
Glyma04g28760.2 Species Glycine max Glycine max 12
Glyma08g41416.1 Species Glycine max Glycine max 12
Glyma18g14801.1 Species Glycine max Glycine max 12
gi|18152785 Species Homo sapiens Homo sapiens 11
Medtr3g017440.1|Mtr Species Medicago truncatula Medicago truncatula 12
gi|164428405 Species Neurospora crassa Neurospora crassa 22
A3C5Z4_ORYSJ|tr Species Oryza sativa Oryza sativa 22
Pp1s291_8V6.1|Ppa Species Physcomitrella patens Physcomitrella patens 22
Pp1s29_156V6.1|Ppa Species Physcomitrella patens Physcomitrella patens 22
A9RUH0_PHYPA|tr Species Physcomitrella patens Physcomitrella patens 22
Potri.001G277100.1|Ptr Species Populus trichocarpa Populus trichocarpa 22
Potri.003G197800.1|Ptr Species Populus trichocarpa Populus trichocarpa 22
Potri.009G071900.1|Ptr Species Populus trichocarpa Populus trichocarpa 22
YPL098C Species Saccharomyces cerevisiae Saccharomyces cerevisiae 22
124520|Smo Species Selaginella moellendorffii Selaginella moellendorffii 22
PGSC0003DMG400031241|PGSC0003DMP400054444|PGSC0003DMT400080257|Stu Species Solanum tuberosum Solanum tuberosum 22
Vca|Vocar20009730m.g Species Volvox carteri Volvox carteri 22
GSVIVG01037255001|GSVIVT01037255001|Vvi Species Vitis vinifera Vitis vinifera 22
GRMZM2G031625_T01|Zma Species Zea mays Zea mays 21

Sequences (FASTA)