ARC Centre of Excellence for Plant Energy Biology

MPIC — MGR2 CDD Results

Sequences for all species were analysed by CDD (Marchler-Bauer et al. 2011) using default settings. *Columns are described in the CDD documentation.

Domains Genes
Romo1 superfamily 28
Romo1 5
QueryHit typePSSM-IDFromToE-ValueBitscoreAccessionShort nameIncompleteSuperfamily
AT3G07910.1 Species Arabidopsis thalianasuperfamily2558484704.8001e-0845.0016cl10931Romo1 superfamily - -
Bra001276 Species Brassica rapasuperfamily25584827691.35472e-0640.7644cl10931Romo1 superfamilyN -
Bra029687 Species Brassica rapasuperfamily2558486719.79858e-0843.846cl10931Romo1 superfamily - -
Bra040039 Species Brassica rapasuperfamily2558486712.48527e-0639.994cl10931Romo1 superfamily - -
gi|71986658 Species Caenorhabditis elegansspecific25584816821.49771e-1873.1212pfam10247Romo1 - cl10931
gi|71986658 Species Caenorhabditis eleganssuperfamily25584816821.49771e-1873.1212cl10931Romo1 superfamily - -
M1VG27_CYAME|tr Species Cyanidioschyzon merolaesuperfamily2558486712.96876e-0948.4684cl10931Romo1 superfamily - -
Cre01.g010500.t1.2 Species Chlamydomonas reinhardtiisuperfamily2558487739.96255e-1152.3204cl10931Romo1 superfamily - -
Carubv10015032m.g|Cru Species Capsella rubellasuperfamily2558485712.08847e-0640.3792cl10931Romo1 superfamily - -
Q54M86|ROMO1_DICDI|sp Species Dictyostelium discoideumspecific25584820865.50769e-2078.514pfam10247Romo1 - cl10931
Q54M86|ROMO1_DICDI|sp Species Dictyostelium discoideumsuperfamily25584820865.50769e-2078.514cl10931Romo1 superfamily - -
Eucgr.J01186.1 Species Eucalyptus grandissuperfamily25584828705.19886e-0844.6164cl10931Romo1 superfamilyN -
Glyma04g28760.2 Species Glycine maxsuperfamily25584827705.02134e-0947.3128cl10931Romo1 superfamilyN -
Glyma08g41416.1 Species Glycine maxsuperfamily2558485703.69329e-1050.7796cl10931Romo1 superfamily - -
Glyma18g14801.1 Species Glycine maxsuperfamily2558485705.73524e-1050.0092cl10931Romo1 superfamily - -
gi|18152785 Species Homo sapiensspecific25584813791.47002e-1770.4248pfam10247Romo1 - cl10931
gi|18152785 Species Homo sapienssuperfamily25584813791.47002e-1770.4248cl10931Romo1 superfamily - -
Medtr3g017440.1|Mtr Species Medicago truncatulasuperfamily25584828771.04242e-0744.2312cl10931Romo1 superfamilyN -
gi|164428405 Species Neurospora crassaspecific25584813791.88847e-2694.6924pfam10247Romo1 - cl10931
gi|164428405 Species Neurospora crassasuperfamily25584813791.88847e-2694.6924cl10931Romo1 superfamily - -
A3C5Z4_ORYSJ|tr Species Oryza sativasuperfamily25584831711.39435e-0743.4608cl10931Romo1 superfamilyN -
Pp1s291_8V6.1|Ppa Species Physcomitrella patenssuperfamily25584826701.62797e-0846.1572cl10931Romo1 superfamilyN -
Pp1s29_156V6.1|Ppa Species Physcomitrella patenssuperfamily25584828705.33903e-1050.3944cl10931Romo1 superfamilyN -
A9RUH0_PHYPA|tr Species Physcomitrella patenssuperfamily25584828705.33903e-1050.3944cl10931Romo1 superfamilyN -
Potri.001G277100.1|Ptr Species Populus trichocarpasuperfamily2558485701.7609e-0948.8536cl10931Romo1 superfamily - -
Potri.003G197800.1|Ptr Species Populus trichocarpasuperfamily2558485702.60857e-0845.772cl10931Romo1 superfamily - -
Potri.009G071900.1|Ptr Species Populus trichocarpasuperfamily2558485701.98939e-0948.8536cl10931Romo1 superfamily - -
YPL098C Species Saccharomyces cerevisiaespecific25584813792.24495e-2797.0036pfam10247Romo1 - cl10931
YPL098C Species Saccharomyces cerevisiaesuperfamily25584813792.24495e-2797.0036cl10931Romo1 superfamily - -
124520|Smo Species Selaginella moellendorffiisuperfamily25584827691.7567e-0846.1572cl10931Romo1 superfamilyN -
PGSC0003DMG400031241|PGSC0003DMP400054444|PGSC0003DMT400080257|Stu Species Solanum tuberosumsuperfamily2558485704.24224e-0742.3052cl10931Romo1 superfamily - -
Vca|Vocar20009730m.g Species Volvox carterisuperfamily2558484708.17091e-1152.3204cl10931Romo1 superfamily - -
GSVIVG01037255001|GSVIVT01037255001|Vvi Species Vitis viniferasuperfamily2558485702.86733e-0948.0832cl10931Romo1 superfamily - -

Sequences (FASTA)