ARC Centre of Excellence for Plant Energy Biology

MPIC — MGE1 Transmembrane Helix Domain Predictions

Num_PredHel indicates the number of predicted transmembrane helix domains calculated by DAS and TMHMM predictors (for methods, see MPIC paper). A tally of both predictors is shown first.


MPIC Gene Locus Species DAS_Num_PredHelTMHMM_Num_PredHel
AT5G17710 Species Arabidopsis thaliana Arabidopsis thaliana
Bra002101 Species Brassica rapa Brassica rapa
Bra023634 Species Brassica rapa Brassica rapa
Bra036775 Species Brassica rapa Brassica rapa
gi|17552458 Species Caenorhabditis elegans Caenorhabditis elegans
CMT423CT Species Cyanidioschyzon merolae Cyanidioschyzon merolae
Cre07.g341600.t1.2 Species Chlamydomonas reinhardtii Chlamydomonas reinhardtii
Carubv10001443m.g Species Capsella rubella Capsella rubella
Carubv10009969m.g Species Capsella rubella Capsella rubella
Cucsa.336010.1 Species Cucumis sativus Cucumis sativus
Cucsa.381320.1 Species Cucumis sativus Cucumis sativus
gi|66810377 Species Dictyostelium discoideum Dictyostelium discoideum
Eucgr.F04384.1 Species Eucalyptus grandis Eucalyptus grandis
Eucgr.K01549.1 Species Eucalyptus grandis Eucalyptus grandis
Esi0000_0394 Species Ectocarpus siliculosus Ectocarpus siliculosus
Esi0074_0089 Species Ectocarpus siliculosus Ectocarpus siliculosus
Glyma03g00840.1 Species Glycine max Glycine max
Glyma06g11310.1 Species Glycine max Glycine max
Glyma19g29841.1 Species Glycine max Glycine max
gi|24308295 Species Homo sapiens Homo sapiens
gi|40255109 Species Homo sapiens Homo sapiens
Medtr3g073450.1 Species Medicago truncatula Medicago truncatula
Medtr7g087250.1 Species Medicago truncatula Medicago truncatula
gi|85082684 Species Neurospora crassa Neurospora crassa
LOC_Os02g39870.1 Species Oryza sativa Oryza sativa
LOC_Os04g35180.1 Species Oryza sativa Oryza sativa
Phpat.004G013500.1 Species Physcomitrella patens Physcomitrella patens
Phpat.012G088500.1 Species Physcomitrella patens Physcomitrella patens
Potri.002G090000.1 Species Populus trichocarpa Populus trichocarpa
Potri.005G171200.1 Species Populus trichocarpa Populus trichocarpa
Potri.013G067900.1 Species Populus trichocarpa Populus trichocarpa
29818.m000399|29818.t000011 Species Ricinus communis Ricinus communis
29908.m005954|29908.t000005 Species Ricinus communis Ricinus communis
YOR232W Species Saccharomyces cerevisiae Saccharomyces cerevisiae
71278 Species Selaginella moellendorffii Selaginella moellendorffii
83859 Species Selaginella moellendorffii Selaginella moellendorffii
PGSC0003DMG400028115|PGSC0003DMT400072243 Species Solanum tuberosum Solanum tuberosum
Vocar20006878m.g Species Volvox carteri Volvox carteri
GSVIVG01008951001|GSVIVT01008951001 Species Vitis vinifera Vitis vinifera
GSVIVG01029905001|GSVIVT01029905001 Species Vitis vinifera Vitis vinifera
GRMZM2G035948_T01 Species Zea mays Zea mays
GRMZM2G036590_T01 Species Zea mays Zea mays
GRMZM2G044684_T01 Species Zea mays Zea mays
GRMZM2G117632_T01 Species Zea mays Zea mays

Sequences (FASTA)