MPIC
Sequences for Populus trichocarpa were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.
| Database | Detected | Description | Start | End | E-Value |
|---|---|---|---|---|---|
| InterPro | IPR000740 | GrpE nucleotide exchange factor: | |||
| Hamap | MF_01151 | Protein GrpE [grpE]. | 111 | 324 | 13.147 |
| PANTHER | PTHR21237 | 92 | 294 | 3.0E-65 | |
| PRINTS | PR00773 | GrpE protein signature | 200 | 216 | 1.75072E-14 |
| PRINTS | PR00773 | GrpE protein signature | 283 | 298 | 1.75072E-14 |
| PRINTS | PR00773 | GrpE protein signature | 228 | 243 | 1.75072E-14 |
| Pfam | PF01025 | GrpE | 175 | 295 | 7.4E-29 |
| InterPro | IPR013805 | GrpE nucleotide exchange factor, coiled-coil: | |||
| Gene3D | G3DSA:3.90.20.20 | 174 | 271 | 1.2E-21 | |
| InterPro | No IPR | Unintegrated signatures: | |||
| Coils | Coil | 171 | 192 | - | |
| PANTHER | PTHR21237:SF4 | 92 | 294 | 3.0E-65 | |
| Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 20 | 329 | - |
| Phobius | SIGNAL_PEPTIDE | Signal peptide region | 1 | 19 | - |
| Phobius | SIGNAL_PEPTIDE_C_REGION | C-terminal region of a signal peptide. | 15 | 19 | - |
| Phobius | SIGNAL_PEPTIDE_H_REGION | Hydrophobic region of a signal peptide. | 4 | 14 | - |
| Phobius | SIGNAL_PEPTIDE_N_REGION | N-terminal region of a signal peptide. | 1 | 3 | - |
| SUPERFAMILY | SSF58014 | 182 | 275 | 4.84E-21 | |
| SignalP_GRAM_POSITIVE | SignalP-TM | 1 | 25 | - | |
