MPIC
Sequences for Populus trichocarpa were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.
| Database | Detected | Description | Start | End | E-Value |
|---|---|---|---|---|---|
| InterPro | IPR000740 | GrpE nucleotide exchange factor: | |||
| Hamap | MF_01151 | Protein GrpE [grpE]. | 75 | 286 | 0.0 |
| PANTHER | PTHR21237 | 47 | 291 | 0.0 | |
| PRINTS | PR00773 | GrpE protein signature | 183 | 198 | 1.700002956E-24 |
| PRINTS | PR00773 | GrpE protein signature | 155 | 171 | 1.700002956E-24 |
| PRINTS | PR00773 | GrpE protein signature | 238 | 253 | 1.700002956E-24 |
| PRINTS | PR00773 | GrpE protein signature | 265 | 284 | 1.700002956E-24 |
| Pfam | PF01025 | GrpE | 127 | 285 | 7.0E-46 |
| ProSitePatterns | PS01071 | grpE protein signature. | 241 | 284 | - |
| InterPro | IPR009012 | GrpE nucleotide exchange factor, head: | |||
| Gene3D | G3DSA:2.30.22.10 | 231 | 288 | 1.9E-21 | |
| SUPERFAMILY | SSF51064 | 232 | 287 | 0.0 | |
| InterPro | IPR013805 | GrpE nucleotide exchange factor, coiled-coil: | |||
| Gene3D | G3DSA:3.90.20.20 | 129 | 227 | 4.5E-24 | |
| InterPro | No IPR | Unintegrated signatures: | |||
| PANTHER | PTHR21237:SF4 | 47 | 291 | 0.0 | |
| Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 18 | 311 | - |
| Phobius | SIGNAL_PEPTIDE | Signal peptide region | 1 | 17 | - |
| Phobius | SIGNAL_PEPTIDE_C_REGION | C-terminal region of a signal peptide. | 13 | 17 | - |
| Phobius | SIGNAL_PEPTIDE_H_REGION | Hydrophobic region of a signal peptide. | 2 | 12 | - |
| Phobius | SIGNAL_PEPTIDE_N_REGION | N-terminal region of a signal peptide. | 1 | 1 | - |
| SUPERFAMILY | SSF58014 | 135 | 228 | 0.0 | |
| SignalP_GRAM_POSITIVE | SignalP-TM | 1 | 18 | - | |
