ARC Centre of Excellence for Plant Energy Biology

MPIC — MDM12 Targeting Predictions

Computational targeting prediction programs were run en bloc for all included species using each algorithm’s default parameters applicable per species kingdom (Boden and Hawkins 2005; Claros 1995; Emanuelsson et al. 2000; Emanuelsson et al. 1999; Neuberger et al. 2003; Small et al. 2004).

Prediction Frequency
cTP 3
SP 2
mTP 1

Abbreviations

cTP: chloroplast targeting peptide (plants only)
ER: endoplasmic reticulum
mTP: mitochrondrial targeting peptide
SP: signal peptide / secretory pathway

cTP predicted plus 2 others Species ChloroPMitoProt2PProwlerPredotarPTS1TargetP
At1g73200 Species Arabidopsis thaliana Arabidopsis thaliana SPSP
AT3G18370.1|C2 domain-containing protein|chr3:6306362-6310256 FORWARD LENGTH=815|Symbols: SYTF, ATSYTF, NTMC2TYPE3, NTMC2T3 Species Arabidopsis thaliana Arabidopsis thaliana mTP
gi|66816495 Species Dictyostelium discoideum Dictyostelium discoideum cTP
gi|85113864 Species Neurospora crassa Neurospora crassa cTP
YOL009C Species Saccharomyces cerevisiae Saccharomyces cerevisiae cTP

Sequences (FASTA)