Computational targeting prediction programs were run en bloc for all included species using each algorithmâs default parameters applicable per species kingdom (Boden and Hawkins 2005; Claros 1995; Emanuelsson et al. 2000; Emanuelsson et al. 1999; Neuberger et al. 2003; Small et al. 2004).
| Prediction | Frequency |
|---|---|
| cTP | 3 |
| SP | 2 |
| mTP | 1 |
cTP: chloroplast targeting peptide (plants only)
ER: endoplasmic reticulum
mTP: mitochrondrial targeting peptide
SP: signal peptide / secretory pathway
| cTP predicted plus 2 others | Species | ChloroP | MitoProt2 | PProwler | Predotar | PTS1 | TargetP |
|---|---|---|---|---|---|---|---|
| At1g73200 |
Arabidopsis thaliana | SP | SP | ||||
| AT3G18370.1|C2 domain-containing protein|chr3:6306362-6310256 FORWARD LENGTH=815|Symbols: SYTF, ATSYTF, NTMC2TYPE3, NTMC2T3 |
Arabidopsis thaliana | mTP | |||||
| gi|66816495 |
Dictyostelium discoideum | cTP | |||||
| gi|85113864 |
Neurospora crassa | cTP | |||||
| YOL009C |
Saccharomyces cerevisiae | cTP |