ARC Centre of Excellence for Plant Energy Biology

MPIC — MDM12 – AT3G18370.1 InterPro Results

Sequences for Arabidopsis thaliana were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.

Database Detected Description Start End E-Value
InterPro IPR000008 C2 domain:
Gene3D G3DSA:2.60.40.150 480 591 1.3E-18
Gene3D G3DSA:2.60.40.150 605 716 4.7E-27
Gene3D G3DSA:2.60.40.150 292 446 4.4E-6
Pfam PF00168 C2 domain 485 560 2.5E-11
Pfam PF00168 C2 domain 609 684 6.0E-18
Pfam PF00168 C2 domain 295 380 0.037
ProSiteProfiles PS50004 C2 domain profile. 607 685 0.0
SMART SM00239 Protein kinase C conserved region 2 (CalB) 292 407 3.00000068E-6
SMART SM00239 Protein kinase C conserved region 2 (CalB) 482 576 1.899998599E-10
SMART SM00239 Protein kinase C conserved region 2 (CalB) 606 700 4.900010278E-19
SUPERFAMILY SSF49562 478 589 0.0
SUPERFAMILY SSF49562 288 400 0.0
SUPERFAMILY SSF49562 601 716 0.0
InterPro No IPR Unintegrated signatures:
Coils Coil 760 791 -
PANTHER PTHR10774 1 795 0.0
PANTHER PTHR10774:SF45 1 795 0.0
Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. 1 29 -
Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. 49 815 -
Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane. 30 48 -

InterPro
Clickable SVG
Courtesy of EMBL-EBI

Sequences (FASTA)