ARC Centre of Excellence for Plant Energy Biology

MPIC — MDM1 – Pp1s7_51V6.1 InterPro Results

Sequences for Physcomitrella patens were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.

Database Detected Description Start End E-Value
InterPro IPR001683 Phox homologous domain:
Gene3D G3DSA:3.30.1520.10 657 767 1.1E-23
Pfam PF00787 PX domain 665 763 4.7E-18
ProSiteProfiles PS50195 PX domain profile. 656 768 0.0
SMART SM00312 PhoX homologous domain, present in p47phox and p40phox. 655 764 4.500000347E-15
SUPERFAMILY SSF64268 658 765 0.0
InterPro IPR003114 Phox-associated domain:
Pfam PF02194 PXA domain 101 279 8.8E-45
ProSiteProfiles PS51207 PXA domain profile. 101 284 0.0
InterPro IPR013937 Sorting nexin, C-terminal:
Pfam PF08628 Sorting nexin C terminal 989 1132 1.1E-16
InterPro No IPR Unintegrated signatures:
Coils Coil 281 305 -
PANTHER PTHR22999 1 1165 0.0
PANTHER PTHR22999:SF18 1 1165 0.0
Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. 54 253 -
Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. 1 11 -
Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. 31 35 -
Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. 273 1165 -
Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane. 254 272 -
Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane. 12 30 -
Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane. 36 53 -
TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane. 16 38 -

InterPro
Clickable SVG
Courtesy of EMBL-EBI

Sequences (FASTA)