MPIC
Sequences for Populus trichocarpa were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.
| Database | Detected | Description | Start | End | E-Value |
|---|---|---|---|---|---|
| InterPro | IPR001683 | Phox homologous domain: | |||
| Gene3D | G3DSA:3.30.1520.10 | 681 | 793 | 5.4E-24 | |
| Pfam | PF00787 | PX domain | 693 | 791 | 2.3E-18 |
| ProSiteProfiles | PS50195 | PX domain profile. | 683 | 795 | 15.916 |
| SMART | SM00312 | PhoX homologous domain, present in p47phox and p40phox. | 687 | 791 | 9.1E-14 |
| SUPERFAMILY | SSF64268 | 684 | 792 | 8.37E-23 | |
| InterPro | IPR003114 | Phox-associated domain: | |||
| Pfam | PF02194 | PXA domain | 110 | 289 | 2.4E-48 |
| ProSiteProfiles | PS51207 | PXA domain profile. | 110 | 294 | 45.834 |
| InterPro | IPR013937 | Sorting nexin, C-terminal: | |||
| Pfam | PF08628 | Sorting nexin C terminal | 955 | 1101 | 1.1E-21 |
| InterPro | IPR013996 | PX-associated, sorting nexin 13: | |||
| SMART | SM00313 | Domain associated with PX domains | 114 | 295 | 2.5E-6 |
| InterPro | No IPR | Unintegrated signatures: | |||
| PANTHER | PTHR22999 | 1 | 1135 | 0.0 | |
| PANTHER | PTHR22999:SF19 | 1 | 1135 | 0.0 | |
| Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | 63 | 1141 | - |
| Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | 1 | 19 | - |
| Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 40 | 44 | - |
| Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 45 | 62 | - |
| Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 20 | 39 | - |
| TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 24 | 46 | - |
