ARC Centre of Excellence for Plant Energy Biology

MPIC — MDM1 – POPTR_0001s18360 InterPro Results

Sequences were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.

Database Detected Description Start End E-Value
InterPro IPR001683 Phox homologous domain:
Gene3D G3DSA:3.30.1520.10 679 789 1.7E-24
Pfam PF00787 PX domain 686 787 2.0E-18
ProSiteProfiles PS50195 PX domain profile. 679 791 16.194
SMART SM00312 PhoX homologous domain, present in p47phox and p40phox. 683 787 5.5E-13
SUPERFAMILY SSF64268 680 788 2.62E-22
InterPro IPR003114 Phox-associated domain:
Pfam PF02194 PXA domain 106 285 3.5E-48
ProSiteProfiles PS51207 PXA domain profile. 106 290 49.382
InterPro IPR013937 Sorting nexin, C-terminal:
Pfam PF08628 Sorting nexin C terminal 958 1104 3.6E-24
InterPro IPR013996 PX-associated, sorting nexin 13:
SMART SM00313 Domain associated with PX domains 101 291 2.1E-6
InterPro No IPR Unintegrated signatures:
PANTHER PTHR22999 1 1138 0.0
PANTHER PTHR22999:SF19 1 1138 0.0
Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. 59 1144 -
Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. 1 19 -
Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. 36 40 -
Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane. 20 35 -
Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane. 41 58 -
TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane. 21 43 -

InterPro
Clickable SVG
Courtesy of EMBL-EBI

Sequences (FASTA)