ARC Centre of Excellence for Plant Energy Biology

MPIC — MDM1 – Medtr4g087210 InterPro Results

Sequences for Medicago truncatula were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.

Database Detected Description Start End E-Value
InterPro IPR001683 Phox homologous domain:
Gene3D G3DSA:3.30.1520.10 670 777 1.4E-19
Pfam PF00787 PX domain 677 775 2.3E-14
ProSiteProfiles PS50195 PX domain profile. 669 779 0.0
SMART SM00312 PhoX homologous domain, present in p47phox and p40phox. 667 775 8.000000242E-8
SUPERFAMILY SSF64268 671 776 0.0
InterPro IPR003114 Phox-associated domain:
Pfam PF02194 PXA domain 107 275 1.1E-49
ProSiteProfiles PS51207 PXA domain profile. 107 284 0.0
InterPro IPR013937 Sorting nexin, C-terminal:
Pfam PF08628 Sorting nexin C terminal 966 1109 1.5E-18
InterPro No IPR Unintegrated signatures:
PANTHER PTHR22999 6 1143 0.0
PANTHER PTHR22999:SF18 6 1143 0.0
Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. 60 1146 -
Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. 1 19 -
Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. 36 40 -
Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane. 41 59 -
Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane. 20 35 -
TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane. 21 38 -

InterPro
Clickable SVG
Courtesy of EMBL-EBI

Sequences (FASTA)